Evidence map›Paper›PMID 38561689›Full record

ArticleBMC genomics2024

Protein profile analysis of Jilin white goose testicles at different stages of the laying cycle by DIA strategy.

Yupu Song, Jingyun Ma, Qiuyuan Liu, Ichraf Mabrouk, Yuxuan Zhou, Jin Yu, Fengshuo Liu, Jingbo Wang, Zhiye Yu, Jingtao Hu and 1 more

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in BMC genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
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  3. TheCurrent issues in molecular biology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Yupu Song *College of Animal Science and Technology, Jilin Agricultural University, 130118, Changchun, China.
Jingyun Ma *College of Animal Science and Technology, Jilin Agricultural University, 130118, Changchun, China.
Qiuyuan Liu *College of Animal Science and Technology, Jilin Agricultural University, 130118, Changchun, China.
Ichraf MabroukCollege of Animal Science and Technology, Jilin Agricultural University, 130118, Changchun, China.
Yuxuan ZhouCollege of Animal Science and Technology, Jilin Agricultural University, 130118, Changchun, China.
Jin YuCollege of Animal Science and Technology, Jilin Agricultural University, 130118, Changchun, China.
Fengshuo LiuCollege of Animal Science and Technology, Jilin Agricultural University, 130118, Changchun, China.
Jingbo WangCollege of Animal Science and Technology, Jilin Agricultural University, 130118, Changchun, China.
Zhiye YuCollege of Animal Science and Technology, Jilin Agricultural University, 130118, Changchun, China.
Jingtao HuCollege of Animal Science and Technology, Jilin Agricultural University, 130118, Changchun, China. jingtaoh@jlau.edu.cn.
Yongfeng SunCollege of Animal Science and Technology, Jilin Agricultural University, 130118, Changchun, China. sunyongfeng@jlau.edu.cn.
Jilin Agricultural University · CNMinistry of Education of the People's Republic of China · CN

Funding

the Development and Utilization Project of Livestock and Poultry Genetic Resources of Animal Husbandry Administration of Jilin Province 2023the Innovation and Entrepreneurship Talent Funding Project of the Human Resources and Social Security Department of Jilin Province 2022ZY16the Key Research and Development Project of the Jilin Provincial Department of Science and Technology 20230202064NC
6 · The paper itself

Abstract

backgroundJilin white goose is an excellent local breed in China, with a high annual egg production and laying eggs mainly from February to July each year. The testis, as the only organ that can produce sperm, can affect the sexual maturity and fecundity of male animals. Its growth and development are affected and regulated by a variety of factors. Proteomics is generally applied to identify and quantify proteins in cells and tissues in order to understand the physiological or pathological changes that occur in tissues or cells under specific conditions. Currently, the female poultry reproductive system has been extensively studied, while few related studies focusing on the regulatory mechanism of the reproductive system of male poultry have been conducted.

resultsA total of 1753 differentially expressed proteins (DEPs) were generated in which there were 594, 391 and 768 different proteins showing differential expression in three stages, Initial of Laying Cycle (ILC), Peak of Laying Cycle (PLC) and End of Laying Cycle (ELC). Furthermore, bioinformatics was used to analyze the DEPs. Gene ontology (GO) enrichment, Clusters of Orthologous Groups (COG), Kyoto Encyclopedia of Genes and Genomes (KEGG) and protein-protein interaction (PPI) network analysis were adopted. All DEPs were found to be implicated in multiple biological processes and pathways associated with testicular development, such as renin secretion, Lysosomes, SNARE interactions in vesicle trafficking, the p53 signaling pathway and pathways related to metabolism. Additionally, the reliability of transcriptome results was verified by real-time quantitative PCR by selecting the transcript abundance of 6 selected DEPs at the three stages of the laying cycle.

conclusionsThe funding in this study will provide critical insight into the complex molecular mechanisms and breeding practices underlying the developmental characteristics of testicles in Jilin white goose.

Indexed as

GeeseTestisAnimalsFemaleGene Expression ProfilingMaleReproducibility of ResultsSemenTranscriptomeJilin white goosePoultryProteomicsSpermTestis

Identifiers

PMID38561689
PMCPMC10986116
OpenAlexW4393393551

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.