Evidence map›Paper›PMID 38559214›Full record

ArticlebioRxiv : the preprint server for biology2024

Comparative Pore Structure and Dynamics for Bacterial Microcompartment Shell Protein Assemblies in Sheets or Shells.

Saad Raza, Daipayan Sarkar, Leanne Jade G Chan, Joshua Mae, Markus Sutter, Christopher J Petzold, Cheryl A Kerfeld, Corie Y Ralston, Sayan Gupta, Josh V Vermaas

Abstract readPreprint
PubMed Full text at PMC Publisher
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Saad RazaMSU-DOE Plant Research Laboratory, Michigan State University, East Lansing MI 48824.ORCID 0000-0003-4842-2192
Daipayan SarkarMSU-DOE Plant Research Laboratory, Michigan State University, East Lansing MI 48824.ORCID 0000-0002-4167-2108
Leanne Jade G ChanBiological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720.
Joshua MaeMSU-DOE Plant Research Laboratory, Michigan State University, East Lansing MI 48824.
Markus SutterMSU-DOE Plant Research Laboratory, Michigan State University, East Lansing MI 48824.ORCID 0000-0001-6290-4820
Christopher J PetzoldBiological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720.ORCID 0000-0002-8270-5228
Cheryl A KerfeldMSU-DOE Plant Research Laboratory, Michigan State University, East Lansing MI 48824.ORCID 0000-0002-9977-8482
Corie Y RalstonMolecular Foundry Division, Lawrence Berkeley National Laboratory, Berkeley CA 94720.ORCID 0000-0002-7899-0951
Sayan GuptaMolecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley CA 94720.
Josh V VermaasMSU-DOE Plant Research Laboratory, Michigan State University, East Lansing MI 48824.ORCID 0000-0003-3139-6469

Funding

User Training and OutreachP30GM124169 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI PAUL David ADAMS, Gregory L Hura · 2017 to 2026
$28.6M
Development of high-dose time-resolved x-ray footprinting technologies to enable the next level of structural analysis for challenging biological problemsR01GM126218 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI RALSTON, CORIE Y · 2018 to 2025
$3.4M
NIGMS NIH HHS P30 GM124169NIGMS NIH HHS R01 GM126218
6 · The paper itself

Abstract

Bacterial microcompartments (BMCs) are protein-bound organelles found in some bacteria which encapsulate enzymes for enhanced catalytic activity. These compartments spatially sequester enzymes within semi-permeable shell proteins, analogous to many membrane-bound organelles. The shell proteins assemble into multimeric tiles; hexamers, trimers, and pentamers, and these tiles self-assemble into larger assemblies with icosahedral symmetry. While icosahedral shells are the predominant form

Identifiers

PMID38559214
PMCPMC10980050

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.