Evidence map›Paper›PMID 38558818›Full record

ArticleFrontiers in immunology2024

Rapid identification of inflammatory arthritis and associated adverse events following immune checkpoint therapy: a machine learning approach.

Steven D Tran, Jean Lin, Carlos Galvez, Luke V Rasmussen, Jennifer Pacheco, Giovanni M Perottino, Kian J Rahbari, Charles D Miller, Jordan D John, Jonathan Theros and 11 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 8 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 2 institutions in 1 country.

Steven D TranCenter for Health Information Partnerships, Northwestern University Feinberg School of Medicine, Chicago, IL, United States.
Jean LinDepartment of Medicine, Division of Rheumatology, Northwestern University Feinberg School of Medicine, Chicago, IL, United States.
Carlos GalvezHematology and Oncology, University of Illinois Health, Chicago, IL, United States.
Luke V RasmussenDepartment of Preventive Medicine, Northwestern University Feinberg School of Medicine, Chicago, IL, United States.
Jennifer PachecoCenter for Genetic Medicine, Northwestern University Feinberg School of Medicine, Chicago, IL, United States.
Giovanni M PerottinoFeinberg School of Medicine, Northwestern University, Chicago, IL, United States.
Kian J RahbariFeinberg School of Medicine, Northwestern University, Chicago, IL, United States.
Charles D MillerFeinberg School of Medicine, Northwestern University, Chicago, IL, United States.
Jordan D JohnFeinberg School of Medicine, Northwestern University, Chicago, IL, United States.
Jonathan TherosFeinberg School of Medicine, Northwestern University, Chicago, IL, United States.
Kelly VogelFeinberg School of Medicine, Northwestern University, Chicago, IL, United States.
Patrick V DinhFeinberg School of Medicine, Northwestern University, Chicago, IL, United States.
Sara MalikFeinberg School of Medicine, Northwestern University, Chicago, IL, United States.
Umar RamzanFeinberg School of Medicine, Northwestern University, Chicago, IL, United States.
Kyle TegtmeyerFeinberg School of Medicine, Northwestern University, Chicago, IL, United States.
Nisha MohindraDepartment of Medicine, Division of Oncology, Northwestern University Feinberg School of Medicine, Chicago, IL, United States.
Jodi L JohnsonRobert H. Lurie Comprehensive Cancer Center of Northwestern University, Chicago, IL, United States.
Yuan LuoDepartment of Preventive Medicine, Northwestern University Feinberg School of Medicine, Chicago, IL, United States.
Abel KhoCenter for Health Information Partnerships, Northwestern University Feinberg School of Medicine, Chicago, IL, United States.
Jeffrey SosmanDepartment of Medicine, Division of Oncology, Northwestern University Feinberg School of Medicine, Chicago, IL, United States.
Theresa L WalunasCenter for Health Information Partnerships, Northwestern University Feinberg School of Medicine, Chicago, IL, United States.
Northwestern University · USUniversity of Illinois Hospital & Health Sciences System · US

Funding

Northwestern University Clinical and Translational Science Institute (NUCATS)UL1TR001422 · NCATS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI D'AQUILA, RICHARD · 2015 to 2023
$56.8M
Resource CoreP30AR072579 · NIAMS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI NAN E ROTHROCK · 2017 to 2026
$8.3M
Northwestern University Clinical and Translational Science Institute (NUCATS)KL2TR001424 · NCATS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI SHARMA, LEENA · 2015 to 2023
$8.1M
POSTDOCTORAL RHEUMATOLOGY TRAININGT32AR007611 · NIAMS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI PERLMAN, HARRIS R · 2001 to 2022
$4.4M
An In Silico, Medical Record-based Model for Understanding the INitiation of Autoimmune Events (IMMUNE)R61AR076824 · NIAMS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI KHO, ABEL N., WALUNAS, THERESA L · 2019 to 2019
$395k
AE2Vec: Medical concept embedding and time-series analysis for automated adverse event detectionF31LM014201 · NLM · NORTHWESTERN UNIVERSITY AT CHICAGO · PI TRAN, STEVEN DUC · 2023 to 2024
$95k
NCATS NIH HHS KL2 TR001424NCATS NIH HHS UL1 TR001422NIAMS NIH HHS P30 AR072579NIAMS NIH HHS R61 AR076824NIAMS NIH HHS T32 AR007611NLM NIH HHS F31 LM014201
6 · The paper itself

Abstract

Introduction: Immune checkpoint inhibitor-induced inflammatory arthritis (ICI-IA) poses a major clinical challenge to ICI therapy for cancer, with 13% of cases halting ICI therapy and ICI-IA being difficult to identify for timely referral to a rheumatologist. The objective of this study was to rapidly identify ICI-IA patients in clinical data and assess associated immune-related adverse events (irAEs) and risk factors. Methods: We conducted a retrospective study of the electronic health records (EHRs) of 89 patients who developed ICI-IA out of 2451 cancer patients who received ICI therapy at Northwestern University between March 2011 to January 2021. Logistic regression and random forest machine learning models were trained on all EHR diagnoses, labs, medications, and procedures to identify ICI-IA patients and EHR codes indicating ICI-IA. Multivariate logistic regression was then used to test associations between ICI-IA and cancer type, ICI regimen, and comorbid irAEs. Results: Logistic regression and random forest models identified ICI-IA patients with accuracies of 0.79 and 0.80, respectively. Key EHR features from the random forest model included ICI-IA relevant features (joint pain, steroid prescription, rheumatoid factor tests) and features suggesting comorbid irAEs (thyroid function tests, pruritus, triamcinolone prescription). Compared to 871 adjudicated ICI patients who did not develop arthritis, ICI-IA patients had higher odds of developing cutaneous (odds ratio [OR]=2.66; 95% Confidence Interval [CI] 1.63-4.35), endocrine (OR=2.09; 95% CI 1.15-3.80), or gastrointestinal (OR=2.88; 95% CI 1.76-4.72) irAEs adjusting for demographics, cancer type, and ICI regimen. Melanoma (OR=1.99; 95% CI 1.08-3.65) and renal cell carcinoma (OR=2.03; 95% CI 1.06-3.84) patients were more likely to develop ICI-IA compared to lung cancer patients. Patients on nivolumab+ipilimumab were more likely to develop ICI-IA compared to patients on pembrolizumab (OR=1.86; 95% CI 1.01-3.43). Discussion: Our machine learning models rapidly identified patients with ICI-IA in EHR data and elucidated clinical features indicative of comorbid irAEs. Patients with ICI-IA were significantly more likely to also develop cutaneous, endocrine, and gastrointestinal irAEs during their clinical course compared to ICI therapy patients without ICI-IA.

Indexed as

Antineoplastic Agents, ImmunologicalArthritisKidney NeoplasmsMelanomaHumansRetrospective StudiesAntineoplastic Agents, Immunologicalbig dataelectronic health recordsimmune checkpoint inhibitor-induced inflammatory arthritisimmune checkpoint inhibitorsimmune-related adverse eventsmachine learning

Identifiers

PMID38558818
PMCPMC10978703
OpenAlexW4392859344

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.