Evidence map›Paper›PMID 38553595›Full record

ArticleNature cell biology2024

Cyclophilin A supports translation of intrinsically disordered proteins and affects haematopoietic stem cell ageing.

Laure Maneix, Polina Iakova, Charles G Lee, Shannon E Moree, Xuan Lu, Gandhar K Datar, Cedric T Hill, Eric Spooner, Jordon C K King, David B Sykes and 10 more

Open access · hybridAbstract read
In one paragraph

Article in Nature cell biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. [Mechanisms of RNA-binding protein phase separation in steroid-associated necrosis of the femoral head].Zhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences · 2026
    Review
  4. Article
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  6. Article
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  8. Article
  9. Article
  10. Article
  11. Review
  12. Biomolecular condensates in immune cell fate.Nature reviews. Immunology · 2025
    Review
  13. Review
  14. Review
  15. Cyclophilin A Regulates Tripartite Motif 5 Alpha Restriction of HIV-1.International journal of molecular sciences · 2025
    Review
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 8 institutions in 4 countries.

Laure Maneix *Huffington Center on Aging, Baylor College of Medicine, Houston, TX, USA.ORCID 0000-0003-0044-5395
Polina Iakova *Huffington Center on Aging, Baylor College of Medicine, Houston, TX, USA.
Charles G LeeDepartment of BioSciences, Rice University, Houston, TX, USA.
Shannon E MoreeHuffington Center on Aging, Baylor College of Medicine, Houston, TX, USA.ORCID 0000-0001-9479-6385
Xuan LuDepartment of Molecular and Cellular Biology, Baylor College of Medicine, Houston, TX, USA.
Gandhar K DatarStem Cells and Regenerative Medicine Center, Baylor College of Medicine, Houston, TX, USA.
Cedric T HillCenter for Regenerative Medicine, Massachusetts General Hospital, Harvard Medical School, Boston, MA, USA.
Eric SpoonerWhitehead Institute for Biomedical Research, Cambridge, MA, USA.
Jordon C K KingHuffington Center on Aging, Baylor College of Medicine, Houston, TX, USA.
David B SykesCenter for Regenerative Medicine, Massachusetts General Hospital, Harvard Medical School, Boston, MA, USA.
Borja SaezCenter for Applied Medical Research, Hematology-Oncology Unit, Pamplona, Navarra, Spain.ORCID 0000-0001-7908-7089
Bruno Di StefanoStem Cells and Regenerative Medicine Center, Baylor College of Medicine, Houston, TX, USA.ORCID 0000-0003-2532-3087
Xi ChenDepartment of Molecular and Cellular Biology, Baylor College of Medicine, Houston, TX, USA.ORCID 0000-0002-7995-6202
Daniela S KrauseGeorg-Speyer-Haus, Institute for Tumor Biology and Experimental Therapy, Frankfurt am Main, Germany.ORCID 0000-0003-3603-1119
Ergun SahinHuffington Center on Aging, Baylor College of Medicine, Houston, TX, USA.
Francis T F TsaiDepartment of Molecular and Cellular Biology, Baylor College of Medicine, Houston, TX, USA.
Margaret A GoodellStem Cells and Regenerative Medicine Center, Baylor College of Medicine, Houston, TX, USA.ORCID 0000-0003-1111-2932
Bradford C BerkDepartment of Medicine, University of Rochester School of Medicine and Dentistry, Rochester, NY, USA.
David T ScaddenCenter for Regenerative Medicine, Massachusetts General Hospital, Harvard Medical School, Boston, MA, USA.
André CaticHuffington Center on Aging, Baylor College of Medicine, Houston, TX, USA. catic@bcm.edu.ORCID 0000-0002-3572-7598
Baylor College of Medicine · USHarvard University · USGeorg Speyer Haus · DEMichael E. DeBakey VA Medical Center · USRice University · USUniversidad de Navarra · ESUniversity of Rochester · USWhitehead Institute for Biomedical Research · US

Funding

Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI Michael M Ittmann · 2007 to 2026
$73.9M
Tissue Analysis & Molecular Imaging CoreP30DK056338 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI James Versalovic · 2001 to 2026
$28.3M
Transcriptional and epigenetic heterogeneity of stem/progenitor cellsP01HL131477 · NHLBI · MASSACHUSETTS GENERAL HOSPITAL · PI DANIEL G TENEN · 2017 to 2026
$24.6M
Hematology Training ProgramT32DK060445 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI GOODELL, MARGARET A. · 2002 to 2023
$8.3M
Structure, Function, and Mechanism of a Mitochondrial ChaperoneR01GM142143 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI TSAI, FRANCIS T.F. · 2021 to 2024
$2.2M
Transcript decay regulates hematopoietic agingR01DK115454 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI CATIC, ANDRE · 2017 to 2021
$1.8M
BD Biosciences Special Order LSRIIS10RR024574 · NCRR · BAYLOR COLLEGE OF MEDICINE · PI LUMPKIN, ELLEN A · 2009 to 2009
$430k
NCI NIH HHS P30 CA125123NCRR NIH HHS S10 RR024574NHLBI NIH HHS P01 HL131477NIDDK NIH HHS P30 DK056338NIDDK NIH HHS R01 DK115454NIDDK NIH HHS T32 DK060445NIGMS NIH HHS R01 GM142143
6 · The paper itself

Abstract

Loss of protein function is a driving force of ageing. We have identified peptidyl-prolyl isomerase A (PPIA or cyclophilin A) as a dominant chaperone in haematopoietic stem and progenitor cells. Depletion of PPIA accelerates stem cell ageing. We found that proteins with intrinsically disordered regions (IDRs) are frequent PPIA substrates. IDRs facilitate interactions with other proteins or nucleic acids and can trigger liquid-liquid phase separation. Over 20% of PPIA substrates are involved in the formation of supramolecular membrane-less organelles. PPIA affects regulators of stress granules (PABPC1), P-bodies (DDX6) and nucleoli (NPM1) to promote phase separation and increase cellular stress resistance. Haematopoietic stem cell ageing is associated with a post-transcriptional decrease in PPIA expression and reduced translation of IDR-rich proteins. Here we link the chaperone PPIA to the synthesis of intrinsically disordered proteins, which indicates that impaired protein interaction networks and macromolecular condensation may be potential determinants of haematopoietic stem cell ageing.

Indexed as

Intrinsically Disordered ProteinsCyclophilin AHematopoietic Stem CellsRNA-Binding ProteinsCyclophilin AIntrinsically Disordered ProteinsRNA-Binding Proteins

Identifiers

PMID38553595
PMCPMC11021199
OpenAlexW4393317394

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.