Evidence map›Paper›PMID 38553521›Full record

ArticleScientific reports2024

A new DNA aptamer which binds to SARS-CoV-2 spike protein and reduces pro-inflammatory response.

Woong Kim, Eun Su Song, Song Ha Lee, Seung Ho Yang, Junhyung Cho, Seok-Jun Kim

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Woong KimInstitute of Well-Aging Medicare & Chosun University LAMP Center, Chosun University, Gwangju, 61452, Republic of Korea.
Eun Su SongCorporate Research Institute, UNICOMPANY, Gwangju, 61008, Republic of Korea.
Song Ha LeeDepartment of Business Management, UNICOMPANY, Gwangju, 61008, Republic of Korea.
Seung Ho YangDepartment of Planning Management, UNICOMPANY, Gwangju, 61008, Republic of Korea.
Junhyung ChoDivision of Emerging Viral Diseases and Vector Research, Centre for Infectious Diseases Research, Korea National Institute of Health, Korea Centres for Disease Control and Prevention Agency, Cheongju, 28159, Republic of Korea.
Seok-Jun KimInstitute of Well-Aging Medicare & Chosun University LAMP Center, Chosun University, Gwangju, 61452, Republic of Korea. heaven1472@chosun.ac.kr.
Chosun University · KRGwangju University · KRKorea National Institute of Health · KR

Funding

Korea government (MSIT) RS-2023-00244707Learning & Academic Research Institution for Master's PhD students, and Postdocs (LAMP) RS-2023-00285353Ministry of SMEs and Startups (MSS, Korea) S3046049
6 · The paper itself

Abstract

COVID-19 caused by SARS-CoV-2 spread rapidly around the world, endangering the health of people globally. The SARS-CoV-2 spike protein initiates entry into target cells by binding to human angiotensin-converting enzyme 2 (ACE2). In this study, we developed DNA aptamers that specifically bind to the SARS-CoV-2 spike protein, thereby inhibiting its binding to ACE2. DNA aptamers are small nucleic acid fragments with random structures that selectively bind to various target molecules. We identified nine aptamers targeting the SARS-CoV-2 spike protein using the systematic evolution of ligands by exponential enrichment (SELEX) method and selected three optimal aptamers by comparing their binding affinities. Additionally, we confirmed that the DNA aptamers suppressed pro-inflammatory cytokines induced by the SARS-CoV-2 spike protein in ACE2-overexpressing HEK293 cells. Overall, the DNA aptamer developed in this study has the potential to bind to the SARS-CoV-2 spike protein and inhibit or block its interaction with ACE2. Thus, our DNA aptamers can be used as new biological tools for the prevention and diagnosis of SARS-CoV-2 infection.

Indexed as

Aptamers, NucleotideCOVID-19Angiotensin-Converting Enzyme 2HEK293 CellsHumansProtein BindingSARS-CoV-2Spike Glycoprotein, CoronavirusAngiotensin-Converting Enzyme 2Aptamers, NucleotideSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2ACE2AptamerDiagnosticPreventionSARS-CoV-2

Identifiers

PMID38553521
PMCPMC10980804
OpenAlexW4393318988

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.