Evidence map›Paper›PMID 38553438›Full record

ArticleNature communications2024

Projective light-sheet microscopy with flexible parameter selection.

Bingying Chen, Bo-Jui Chang, Stephan Daetwyler, Felix Zhou, Shiv Sharma, Donghoon M Lee, Amruta Nayak, Jungsik Noh, Konstantin Dubrovinski, Elizabeth H Chen and 2 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Adaptive optics in an oblique plane microscope.Biomedical optics express · 2024
    Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Bingying Chen *Lyda Hill Department of Bioinformatics, University of Texas Southwestern Medical Center, Dallas, TX, USA.
Bo-Jui Chang *Lyda Hill Department of Bioinformatics, University of Texas Southwestern Medical Center, Dallas, TX, USA.ORCID http://orcid.org/0000-0002-5513-7106
Stephan DaetwylerLyda Hill Department of Bioinformatics, University of Texas Southwestern Medical Center, Dallas, TX, USA.ORCID http://orcid.org/0000-0002-7444-4734
Felix ZhouLyda Hill Department of Bioinformatics, University of Texas Southwestern Medical Center, Dallas, TX, USA.ORCID http://orcid.org/0000-0003-4463-1165
Shiv SharmaDepartment of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, TX, USA.
Donghoon M LeeDepartment of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, TX, USA.ORCID http://orcid.org/0000-0002-1078-6655
Amruta NayakDepartment of Molecular Genetics and Cell Biology, University of Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0003-1833-3113
Jungsik NohLyda Hill Department of Bioinformatics, University of Texas Southwestern Medical Center, Dallas, TX, USA.
Konstantin DubrovinskiDepartment of Biophysics, University of Texas Southwestern Medical Center, Dallas, TX, USA.
Elizabeth H ChenDepartment of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, TX, USA.ORCID http://orcid.org/0000-0003-2707-6083
Michael GlotzerDepartment of Molecular Genetics and Cell Biology, University of Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0002-8723-7232
Reto FiolkaLyda Hill Department of Bioinformatics, University of Texas Southwestern Medical Center, Dallas, TX, USA. reto.fiolka@utsouthwestern.edu.ORCID http://orcid.org/0000-0002-4636-5000

Funding

UTSW-UNC Center for Cell Signaling AnalysisRM1GM145399 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI Kevin Michael Dean, Klaus M. Hahn · 2022 to 2026
$6.2M
Molecular Mechanisms of Myoblast FusionR01AR053173 · NIAMS · UT SOUTHWESTERN MEDICAL CENTER · PI CHEN, ELIZABETH H · 2006 to 2022
$5.3M
Spatial and temporal control of Rho family GTPasesR35GM127091 · NIGMS · UNIVERSITY OF CHICAGO · PI Michael A. Glotzer · 2018 to 2026
$3.5M
Decoding the mechanisms of cell-cell fusion - Renewal - 1R35GM136316 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI Elizabeth H Chen · 2020 to 2026
$3.1M
Transformative microscopes to image across spatiotemporal scalesR35GM133522 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI Reto Paul Fiolka · 2019 to 2026
$3.1M
Physical aspects of Drosophila Gastrulation - Equipment supplementR01GM134207 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI Konstantin Doubrovinski · 2019 to 2026
$3.0M
Investigating mechanisms of vertebrate myoblast fusion using zebrafish as a modelR01AR075005 · NIAMS · UT SOUTHWESTERN MEDICAL CENTER · PI CHEN, ELIZABETH H · 2020 to 2024
$1.8M
Physical mechanisms of cell rearrangements during germband extension in Drosophila melanogasterR21HD105189 · NICHD · UT SOUTHWESTERN MEDICAL CENTER · PI DOUBROVINSKI, KONSTANTIN, MANDADAPU, KRANTHI KIRAN · 2021 to 2022
$459k
NIAMS NIH HHS R01 AR053173NIAMS NIH HHS R01 AR075005NICHD NIH HHS R21 HD105189NIGMS NIH HHS R01 GM134207NIGMS NIH HHS R35 GM127091NIGMS NIH HHS R35 GM133522NIGMS NIH HHS R35 GM136316NIGMS NIH HHS RM1 GM145399
6 · The paper itself

Abstract

Projection imaging accelerates volumetric interrogation in fluorescence microscopy, but for multi-cellular samples, the resulting images may lack contrast, as many structures and haze are summed up. Here, we demonstrate rapid projective light-sheet imaging with parameter selection (props) of imaging depth, position and viewing angle. This allows us to selectively image different sub-volumes of a sample, rapidly switch between them and exclude background fluorescence. Here we demonstrate the power of props by functional imaging within distinct regions of the zebrafish brain, monitoring calcium firing inside muscle cells of moving Drosophila larvae, super-resolution imaging of selected cell layers, and by optically unwrapping the curved surface of a Drosophila embryo. We anticipate that props will accelerate volumetric interrogation, ranging from subcellular to mesoscopic scales.

Indexed as

DrosophilaZebrafishAnimalsBrainLarvaMicroscopy, Fluorescence

Identifiers

PMID38553438
PMCPMC10980818

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.