Evidence map›Paper›PMID 38551799›Full record

ArticleMolecular biology reports2024

Development and characterization of 40 InDel markers from the major histocompatibility complex genes of largemouth bass (Micropterus salmoides).

Meng Zhang, Zerui Wang, Jiao Cui, Xiao Ma, Zhigang Qiao, Xianghui Kong, Ruwei Xu, Shengjie Li, Jinxing Du, Chunlong Zhao

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Article in Molecular biology reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Meng ZhangCollege of Life Sciences, Henan Normal University, Xinxiang, 453007, China. zhangmeng@htu.edu.cn.ORCID https://orcid.org/0000-0002-7918-0811
Zerui WangCollege of Fisheries, Henan Normal University, Xinxiang, 453007, China.
Jiao CuiCollege of Fisheries, Henan Normal University, Xinxiang, 453007, China.
Xiao MaCollege of Fisheries, Henan Normal University, Xinxiang, 453007, China.
Zhigang QiaoCollege of Fisheries, Henan Normal University, Xinxiang, 453007, China.
Xianghui KongCollege of Life Sciences, Henan Normal University, Xinxiang, 453007, China.
Ruwei XuHangzhou Xiaoshan Donghai Aquaculture Co., Ltd, Hangzhou, 310012, China.
Shengjie LiPearl River Fisheries Research Institute, Key Laboratory of Tropical and Subtropical Fishery Resource Application and Cultivation, Chinese Academy of Fisheries Sciences, China Ministry of Agriculture, Guangzhou, 510380, China.
Jinxing DuPearl River Fisheries Research Institute, Key Laboratory of Tropical and Subtropical Fishery Resource Application and Cultivation, Chinese Academy of Fisheries Sciences, China Ministry of Agriculture, Guangzhou, 510380, China.
Chunlong ZhaoHebei Key Laboratory of Marine Biological Resources and Environment, Hebei Ocean and Fisheries Science Research Institute, Qinhuangdao, 066200, China. zhaochunlong1968@163.com.
Henan Normal University · CNChinese Academy of Fishery Sciences · CNHebei Science and Technology Department · CNThe First People's Hospital of Xiaoshan District, Hangzhou · CN

Funding

National Natural Science Foundation of China 32102776Science and Technology Department of Henan Province 232102111950Science and Technology Program of Guangzhou 202201010211Special Strategy for Rural Revitalization of Guangdong Province 2022 (31)
6 · The paper itself

Abstract

backgroundThe genetic improvement in growth and food habit domestication of largemouth bass (Micropterus salmoides) have made breakthroughs in past decades, while the relevant work on disease resistance were rarely carried out. Major histocompatibility complex (MHC) genes, which are well known as their numbers and high polymorphisms, have been used as candidate genes to mine disease-resistant-related molecular markers in many species. METHODS AND

resultsIn present study, we developed and characterized 40 polymorphic and biallelic InDel markers from the major histocompatibility complex genes of largemouth bass. The minor allele frequency, observed heterozygosity, expected heterozygosity and polymorphic information content of these markers ranged from 0.0556 to 0.5000, 0.1111 to 0.6389, 0.1064 to 0.5070, and 0.0994 to 0.3750, respectively. Three loci deviated significantly from Hardy-Weinberg equilibrium, while linkage disequilibrium existed at none of these loci.

conclusionThese InDel markers might provide references for the further correlation analysis and molecular assisted selection of disease resistance in largemouth bass.

Indexed as

BassAnimalsDisease ResistanceGene FrequencyMajor Histocompatibility ComplexPolymorphism, GeneticInDelMajor histocompatibility complexMarkerMicropterus salmoides

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PMID38551799
OpenAlexW4393318852

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