Evidence map›Paper›PMID 38551686›Full record

ArticleMolecular biology reports2024

Novel and deleterious nucleotide variations in the HAND1 gene probably affect miRNA target sites and protein function in pediatric patients with congenital heart disease.

Fateme Tabrizi, Mehri Khatami, Mohammad Mehdi Heidari, José Bragança, Hasan Tatari, Mohsen Namnabat, Mehdi Hadadzadeh, Mohammad Ali Navabi Shirazi

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Article in Molecular biology reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

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5 · Who and what money

Authors and funding

8 authors at 6 institutions in 3 countries.

Fateme TabriziDepartment of Biology, Yazd University, Yazd, Iran.ORCID http://orcid.org/0000-0001-7856-1527
Mehri KhatamiDepartment of Biology, Yazd University, Yazd, Iran. m.khatami@yazd.ac.ir.ORCID http://orcid.org/0000-0002-5840-5399
Mohammad Mehdi HeidariDepartment of Biology, Yazd University, Yazd, Iran.ORCID http://orcid.org/0000-0002-3328-4746
José BragançaFaculty of Medicine and Biomedical Sciences, Algarve Biomedical Centre Research Institute (ABC-RI), University of Algarve, Faro, Portugal.ORCID http://orcid.org/0000-0001-9566-400X
Hasan TatariRajaie Cardiovascular Medical and Research Center, Iran University of Medical Sciences, Tehran, Iran.ORCID http://orcid.org/0000-0002-3343-8581
Mohsen NamnabatDepartment of Biology, Faculty of Science, University of Copenhagen, Copenhagen, Denmark.ORCID http://orcid.org/0000-0002-7181-9772
Mehdi HadadzadehDepartment of Cardiac Surgery, Afshar Hospital, Shahid Sadoughi University of Medical Sciences, Yazd, Iran.ORCID http://orcid.org/0000-0003-0066-7369
Mohammad Ali Navabi ShiraziDepartment of Pediatric Cardiac Surgery, Children's Medical Center, Tehran University of Medical Sciences, Tehran, Iran.ORCID http://orcid.org/0000-0001-5571-093X
Yazd University · IRAlgarve Biomedical Center · PTChildren's Medical Center · IRIran University of Medical Sciences · IRShahid Sadoughi University of Medical Sciences and Health Services · IRUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCongenital heart disease (CHD) is the most prevalent developmental defect and principal cause of infant mortality and affects cardiac and large blood vessel structures in approximately 1% of live births worldwide. To date, numerous studies have related critical genetic dysfunctions to the pathogenesis of CHDs. However, the genetic basis underlying CHD remains largely unknown. In the present study, we investigated the association of nucleotide variations in coding and noncoding regions of the HAND1 gene with the risk of CHD. The HAND1 gene, encoding a helix-loop-helix transcription factor, is particularly relevant for mechanisms underlying CHD since it plays a significant role in heart development. METHODS AND

resultsThe genomic DNA of 150 unrelated pediatric patients with CHD was screened by PCR-SSCP and direct sequencing. Four novel and heterozygous missense mutations were identified in the first exon, with three causing amino acid substitutions (p.Val149Met, p.Tyr142His, and p.Leu146Met). In-silico analysis also indicated their deleterious impact on protein structure and function. In addition, we identified five novel nucleotide variants in the 3'UTR region (c.*461, c.*342, c.*529, c.*448, c.*593), potentially altering the target sites of miRNAs. These changes include the loss of certain target sites and the acquisition of new ones.

conclusionsThese findings confirm the phenotypic association between CHDs and HAND1 mutations and can pave the way for developing new preventive and therapeutic strategies.

Indexed as

Basic Helix-Loop-Helix ProteinsHeart Defects, CongenitalMicroRNAsChildHumansInfantMutationBasic Helix-Loop-Helix Proteinshelix-loop-helix protein, eHANDMicroRNAs3′UTRCongenital heart diseaseHAND1Heart developmentNon-coding RNA

Identifiers

PMID38551686
OpenAlexW4393318469

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.