Evidence map›Paper›PMID 38549946›Full record

ArticleBioinformatics advances2024

MERITS: a web-based integrated

Zhijie He, Cong Wang, Xudong Guo, Heyun Sun, Yue Bi, Miranda E Pitt, Chen Li, Jiangning Song, Lachlan J M Coin, Fuyi Li

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Bioinformatics advances, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Frontiers in tuberculosis · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Zhijie HeCollege of Information Engineering, Northwest A&F University, Yangling, Shaanxi 712100, China.ORCID https://orcid.org/0009-0000-8770-7858
Cong WangCollege of Information Engineering, Northwest A&F University, Yangling, Shaanxi 712100, China.
Xudong GuoCollege of Information Engineering, Northwest A&F University, Yangling, Shaanxi 712100, China.
Heyun SunSouth Australian immunoGENomics Cancer Institute (SAiGENCI), The University of Adelaide, Adelaide, SA 5005, Australia.
Yue BiDepartment of Biochemistry and Molecular Biology, Biomedicine Discovery Institute, Monash University, Melbourne, VIC 3800, Australia.
Miranda E PittThe Peter Doherty Institute for Infection and Immunity, The University of Melbourne, Melbourne, VIC 3000, Australia.
Chen LiDepartment of Biochemistry and Molecular Biology, Biomedicine Discovery Institute, Monash University, Melbourne, VIC 3800, Australia.ORCID https://orcid.org/0000-0002-1847-754X
Jiangning SongDepartment of Biochemistry and Molecular Biology, Biomedicine Discovery Institute, Monash University, Melbourne, VIC 3800, Australia.ORCID https://orcid.org/0000-0001-8031-9086
Lachlan J M CoinThe Peter Doherty Institute for Infection and Immunity, The University of Melbourne, Melbourne, VIC 3000, Australia.ORCID https://orcid.org/0000-0002-4300-455X
Fuyi LiCollege of Information Engineering, Northwest A&F University, Yangling, Shaanxi 712100, China.ORCID https://orcid.org/0000-0001-5216-3213

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Motivation: PE/PPE proteins, highly abundant in the Results: Addressing this gap, we introduce MycobactERIal PE/PPE proTeinS (MERITS), a comprehensive 3D structure database specifically designed for PE/PPE proteins. MERITS hosts 22 353 non-redundant PE/PPE proteins, encompassing details like physicochemical properties, subcellular localization, post-translational modification sites, protein functions, and measures of antigenicity, toxicity, and allergenicity. MERITS also includes data on their secondary and tertiary structure, along with other relevant biological information. MERITS is designed to be user-friendly, offering interactive search and data browsing features to aid researchers in exploring the potential functions of PE/PPE proteins. MERITS is expected to become a crucial resource in the field, aiding in developing new diagnostics and vaccines by elucidating the sequence-structure-functional relationships of PE/PPE proteins. Availability and implementation: MERITS is freely accessible at http://merits.unimelb-biotools.cloud.edu.au/.

Identifiers

PMID38549946
PMCPMC10973932

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.