Evidence map›Paper›PMID 38549050›Full record

ArticleBMC genomics2024

Mechanism of action of microRNA166 on nitric oxide in alfalfa (Medicago sativa L.) under drought stress.

Bochuang Wei, Yizhen Wang, Qian Ruan, Xiaolin Zhu, Xian Wang, Tianjie Wang, Ying Zhao, Xiaohong Wei

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
5.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Bochuang WeiCollege of Life Science and Technology, Gansu Agricultural University, Lanzhou, 730070, China.
Yizhen WangCollege of Life Science and Technology, Gansu Agricultural University, Lanzhou, 730070, China.
Qian RuanCollege of Life Science and Technology, Gansu Agricultural University, Lanzhou, 730070, China.
Xiaolin ZhuCollege of Life Science and Technology, Gansu Agricultural University, Lanzhou, 730070, China.
Xian WangCollege of Life Science and Technology, Gansu Agricultural University, Lanzhou, 730070, China.
Tianjie WangCollege of Life Science and Technology, Gansu Agricultural University, Lanzhou, 730070, China.
Ying ZhaoCollege of Life Science and Technology, Gansu Agricultural University, Lanzhou, 730070, China.
Xiaohong WeiCollege of Life Science and Technology, Gansu Agricultural University, Lanzhou, 730070, China. weixh@gsau.edu.cn.
Gansu Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAlfalfa is a perennial forage crop of high importance, but its cultivation is often affected by drought stress. Currently, the investigation of drought-related small RNAs is a popular research topic to uncover plant drought resistance mechanisms. Among these small RNAs, microRNA166 (miR166) is associated with drought in numerous plant species. Initial small RNA sequencing studies have shown that miR166 is highly responsive to exogenous nitric oxide (NO) and drought. Therefore, analyzing the expression of Msa-miR166 under nitric oxide and drought treatment is significant.

resultBioinformatics analysis revealed that the miR166 family is widely distributed among plants, ranging from mosses to eudicots, with significant distribution differences between species. The evolutionary degree of Msa-miR166s is highly similar to that of Barrel medic (Medicago truncatula) and Soybean (Glycine max), but significantly different from the model plant Arabidopsis (Arabidopsis thaliana). It is suggested that there are no significant differences in miR166s within the species, and members of Msa-miR166s can form a typical stem-loop. The lowest level of exogenous nitric oxide was observed in Msa-miR166s under drought stress, followed by individual drought, and the highest level was observed after removing endogenous nitric oxide.

conclusionIn response to short-term drought, Msa-miR166s down-regulate expression in alfalfa (Medicago sativa L.). Exogenous nitric oxide can reduce the expression of Msa-miR166s in response to short-term drought. These findings suggest that Msa-miR166e-5p is responsive to environmental changes. The expression levels of target genes showed an opposite trend to Msa-miR166s, verifying the accuracy of Degradome sequencing in the early stage. This suggests that alfalfa experiences drought stress when regulated by exogenous nitric oxide, targeting HD ZIP-III, FRI, and CoA ligase genes. Additionally, the expression of Msa-miR166s in response to drought stress varies between leaves and roots, indicating spatiotemporal specificity.

Indexed as

ArabidopsisArabidopsis ProteinsMicroRNAsBase SequenceDroughtsGene Expression Regulation, PlantMedicago sativaNitric OxidePlant ProteinsStress, PhysiologicalArabidopsis ProteinsFRI protein, ArabidopsisMicroRNAsMIRN166 microRNA, ArabidopsisNitric OxidePlant ProteinsAlfalfaDroughtMIR166

Identifiers

PMID38549050
PMCPMC10976769
OpenAlexW4393276868

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.