Evidence map›Paper›PMID 38548776›Full record

ArticleNature communications2024

Remodeling of the postsynaptic proteome in male mice and marmosets during synapse development.

Takeshi Kaizuka, Takehiro Suzuki, Noriyuki Kishi, Kota Tamada, Manfred W Kilimann, Takehiko Ueyama, Masahiko Watanabe, Tomomi Shimogori, Hideyuki Okano, Naoshi Dohmae and 1 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it, 7 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 2 countries.

Takeshi Kaizuka *RIKEN Brain Science Institute, Wako, Saitama, 351-0198, Japan.
Takehiro Suzuki *Biomolecular Characterization Unit, RIKEN Center for Sustainable Resource Science, Wako, Saitama, 351-0198, Japan.ORCID http://orcid.org/0000-0002-0585-6305
Noriyuki KishiRIKEN Brain Science Institute, Wako, Saitama, 351-0198, Japan.
Kota TamadaRIKEN Brain Science Institute, Wako, Saitama, 351-0198, Japan.ORCID http://orcid.org/0000-0002-6575-6189
Manfred W KilimannMax Planck Institute for Experimental Medicine, Göttingen, 37075, Germany.ORCID http://orcid.org/0000-0002-3536-5814
Takehiko UeyamaLaboratory of Molecular Pharmacology, Biosignal Research Center, Kobe University, Nada, Kobe, 657-8501, Japan.ORCID http://orcid.org/0000-0002-5647-3937
Masahiko WatanabeDepartment of Anatomy, Faculty of Medicine, Hokkaido University, Kita, Sapporo, 060-8638, Japan.
Tomomi ShimogoriRIKEN Brain Science Institute, Wako, Saitama, 351-0198, Japan.
Hideyuki OkanoRIKEN Brain Science Institute, Wako, Saitama, 351-0198, Japan.ORCID http://orcid.org/0000-0001-7482-5935
Naoshi DohmaeBiomolecular Characterization Unit, RIKEN Center for Sustainable Resource Science, Wako, Saitama, 351-0198, Japan.ORCID http://orcid.org/0000-0002-5242-9410
Toru TakumiRIKEN Brain Science Institute, Wako, Saitama, 351-0198, Japan. takumit@med.kobe-u.ac.jp.ORCID http://orcid.org/0000-0001-7153-266X
RIKEN Center for Brain Science · JPRIKEN Center for Sustainable Resource Science · JPHokkaido University · JPKeio University · JPKobe University · JPMax Planck Institute of Experimental Medicine · DE

Funding

MEXT | Japan Society for the Promotion of Science (JSPS) 23H04233
6 · The paper itself

Abstract

Postsynaptic proteins play crucial roles in synaptic function and plasticity. During brain development, alterations in synaptic number, shape, and stability occur, known as synapse maturation. However, the postsynaptic protein composition changes during development are not fully understood. Here, we show the trajectory of the postsynaptic proteome in developing male mice and common marmosets. Proteomic analysis of mice at 2, 3, 6, and 12 weeks of age shows that proteins involved in synaptogenesis are differentially expressed during this period. Analysis of published transcriptome datasets shows that the changes in postsynaptic protein composition in the mouse brain after 2 weeks of age correlate with gene expression changes. Proteomic analysis of marmosets at 0, 2, 3, 6, and 24 months of age show that the changes in the marmoset brain can be categorized into two parts: the first 2 months and after that. The changes observed in the first 2 months are similar to those in the mouse brain between 2 and 12 weeks of age. The changes observed in marmoset after 2 months old include differential expression of synaptogenesis-related molecules, which hardly overlap with that in mice. Our results provide a comprehensive proteomic resource that underlies developmental synapse maturation in rodents and primates.

Indexed as

Biological PhenomenaCallithrixAnimalsMaleMiceProteomeProteomicsSynapsesProteome

Identifiers

PMID38548776
PMCPMC10979008
OpenAlexW4393261738

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.