Evidence map›Paper›PMID 38548752›Full record

ArticleNature communications2024

Comprehensive mutational scanning of EGFR reveals TKI sensitivities of extracellular domain mutants.

Tikvah K Hayes, Elisa Aquilanti, Nicole S Persky, Xiaoping Yang, Erica E Kim, Lisa Brenan, Amy B Goodale, Douglas Alan, Ted Sharpe, Robert E Shue and 17 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
10.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 26 citations in OpenAlex.

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  12. Bioactive Potential ofPlants (Basel, Switzerland) · 2025
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  14. CNS Tumor with BCOR/BCORL1 Fusion: A Rare Tumor Entity.International journal of molecular sciences · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

27 authors at 5 institutions in 1 country.

Tikvah K HayesDepartment of Medical Oncology, Dana-Farber Cancer Institute & Harvard Medical School, Boston, MA, USA.
Elisa AquilantiDepartment of Medical Oncology, Dana-Farber Cancer Institute & Harvard Medical School, Boston, MA, USA.
Nicole S PerskyCancer Program, The Broad Institute of M.I.T. and Harvard, Cambridge, MA, USA.
Xiaoping YangGenetic Perturbation Platform, The Broad Institute of M.I.T. and Harvard, Cambridge, MA, USA.ORCID http://orcid.org/0000-0002-6811-4915
Erica E KimDepartment of Medical Oncology, Dana-Farber Cancer Institute & Harvard Medical School, Boston, MA, USA.
Lisa BrenanCancer Program, The Broad Institute of M.I.T. and Harvard, Cambridge, MA, USA.
Amy B GoodaleGenetic Perturbation Platform, The Broad Institute of M.I.T. and Harvard, Cambridge, MA, USA.
Douglas AlanGenetic Perturbation Platform, The Broad Institute of M.I.T. and Harvard, Cambridge, MA, USA.
Ted SharpeData Science Platform, The Broad Institute of M.I.T. and Harvard Cambridge, Cambridge, MA, USA.
Robert E ShueDepartment of Medical Oncology, Dana-Farber Cancer Institute & Harvard Medical School, Boston, MA, USA.
Lindsay WestlakeCancer Program, The Broad Institute of M.I.T. and Harvard, Cambridge, MA, USA.
Lior GolombDepartment of Medical Oncology, Dana-Farber Cancer Institute & Harvard Medical School, Boston, MA, USA.
Brianna R SilvermanDepartment of Medical Oncology, Dana-Farber Cancer Institute & Harvard Medical School, Boston, MA, USA.
Myshal D MorrisSummer Honors Undergraduate Research Program, Harvard Medical School, Boston, MA, USA.
Ty Running FisherSummer Honors Undergraduate Research Program, Harvard Medical School, Boston, MA, USA.
Eden BeyeneSummer Honors Undergraduate Research Program, Harvard Medical School, Boston, MA, USA.
Yvonne Y LiDepartment of Medical Oncology, Dana-Farber Cancer Institute & Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0002-1741-1995
Andrew D CherniackDepartment of Medical Oncology, Dana-Farber Cancer Institute & Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0003-0470-0111
Federica PiccioniGenetic Perturbation Platform, The Broad Institute of M.I.T. and Harvard, Cambridge, MA, USA.ORCID http://orcid.org/0000-0003-1210-3210
J Kevin HicksDepartment of Pathology, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA.
Andrew S ChiCenter for Neuro-Oncology, Division of Neuro-Oncology, Massachusetts General Hospital, Boston, MA, USA.
Daniel P CahillCenter for Neuro-Oncology, Division of Neuro-Oncology, Massachusetts General Hospital, Boston, MA, USA.
Jorg DietrichDepartment of Neurology, Division of Neuro-Oncology, Massachusetts General Hospital, Boston, MA, USA.
Tracy T BatchelorDepartment of Neurology, Brigham and Women's Hospital & Harvard Medical School, Boston, MA, USA.
David E RootGenetic Perturbation Platform, The Broad Institute of M.I.T. and Harvard, Cambridge, MA, USA.ORCID http://orcid.org/0000-0001-5122-861X
Cory M JohannessenCancer Program, The Broad Institute of M.I.T. and Harvard, Cambridge, MA, USA.ORCID http://orcid.org/0000-0002-2618-1036
Matthew MeyersonDepartment of Medical Oncology, Dana-Farber Cancer Institute & Harvard Medical School, Boston, MA, USA. matthew_meyerson@dfci.harvard.edu.ORCID http://orcid.org/0000-0002-9133-8108
Broad Institute · USHarvard University · USMassachusetts General Hospital · USBrigham and Women's Hospital · USMoffitt Cancer Center · US

Funding

Physician Scientist Training in Cancer ResearchT32CA009172 · NCI · DANA-FARBER CANCER INSTITUTE · PI Jennifer R Brown, James A. DeCaprio · 1985 to 2026
$17.1M
NKX2-1 Enhancer Amplification and Lineage Addiction in Lung AdenocarcinomaR35CA197568 · NCI · DANA-FARBER CANCER INST · PI Matthew L. Meyerson · 2015 to 2026
$12.4M
Functional Characterization of HER Family Variant Biology and Resistance in CancerR00CA248836 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI HAYES, TIKVAH K · 2023 to 2025
$706k
Functional Characterization of HER Family Variant Biology and Resistance in CancerK99CA248836 · NCI · DANA-FARBER CANCER INST · PI HAYES, TIKVAH K · 2021 to 2022
$286k
NCI NIH HHS K99 CA248836NCI NIH HHS R00 CA248836NCI NIH HHS R35 CA197568NCI NIH HHS T32 CA009172
6 · The paper itself

Abstract

The epidermal growth factor receptor, EGFR, is frequently activated in lung cancer and glioblastoma by genomic alterations including missense mutations. The different mutation spectra in these diseases are reflected in divergent responses to EGFR inhibition: significant patient benefit in lung cancer, but limited in glioblastoma. Here, we report a comprehensive mutational analysis of EGFR function. We perform saturation mutagenesis of EGFR and assess function of ~22,500 variants in a human EGFR-dependent lung cancer cell line. This approach reveals enrichment of erlotinib-insensitive variants of known and unknown significance in the dimerization, transmembrane, and kinase domains. Multiple EGFR extracellular domain variants, not associated with approved targeted therapies, are sensitive to afatinib and dacomitinib in vitro. Two glioblastoma patients with somatic EGFR G598V dimerization domain mutations show responses to dacomitinib treatment followed by within-pathway resistance mutation in one case. In summary, this comprehensive screen expands the landscape of functional EGFR variants and suggests broader clinical investigation of EGFR inhibition for cancers harboring extracellular domain mutations.

Indexed as

GlioblastomaLung NeoplasmsErbB ReceptorsHumansMutationProtein Kinase InhibitorsEGFR protein, humanErbB ReceptorsProtein Kinase Inhibitors

Identifiers

PMID38548752
PMCPMC10978866
OpenAlexW4393280372

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.