Evidence map›Paper›PMID 38547143›Full record

ArticlePloS one2024

Quantitative imaging and semiotic phenotyping of mitochondrial network morphology in live human cells.

Sophie Charrasse, Victor Racine, Charlotte Saint-Omer, Titouan Poquillon, Loïc Lionnard, Marine Ledru, Christophe Gonindard, Sandrine Delaunois, Karima Kissa, Richard E Frye and 5 more

Abstract read
In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Sophie CharrasseISEM, Institut des Sciences de l'Evolution, UMR 5554, Université Montpellier, CNRS, IRD, Montpellier, France.
Victor RacineQuantaCell SAS, Institute for Regenerative Medicine and Biotherapy (IRMB), Saint Eloi Hospital, Montpellier University Hospital, Montpellier, France.
Charlotte Saint-OmerISEM, Institut des Sciences de l'Evolution, UMR 5554, Université Montpellier, CNRS, IRD, Montpellier, France.
Titouan PoquillonISEM, Institut des Sciences de l'Evolution, UMR 5554, Université Montpellier, CNRS, IRD, Montpellier, France.
Loïc LionnardISEM, Institut des Sciences de l'Evolution, UMR 5554, Université Montpellier, CNRS, IRD, Montpellier, France.
Marine LedruISEM, Institut des Sciences de l'Evolution, UMR 5554, Université Montpellier, CNRS, IRD, Montpellier, France.
Christophe GonindardClariant Active Ingredients, Toulouse, France.
Sandrine DelaunoisClariant Active Ingredients, Toulouse, France.
Karima KissaVBIC, INSERM U1047, Université de Montpellier, Montpellier, France.
Richard E FryeAutism Discovery and Treatment Foundation, Phoenix, AZ, United States America.
Manuela PastoreSTATABIO BioCampus, Université de Montpellier, CNRS, INSERM, Montpellier, France.ORCID 0000-0002-1887-6380
Christelle ReynesSTATABIO BioCampus, Université de Montpellier, CNRS, INSERM, Montpellier, France.
Mathilde FrechetClariant Active Ingredients, Toulouse, France.
Hanane ChajraClariant Active Ingredients, Toulouse, France.
Abdel AouacheriaISEM, Institut des Sciences de l'Evolution, UMR 5554, Université Montpellier, CNRS, IRD, Montpellier, France.ORCID 0000-0001-6712-9595

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The importance of mitochondria in tissue homeostasis, stress responses and human diseases, combined to their ability to transition between various structural and functional states, makes them excellent organelles for monitoring cell health. There is therefore a need for technologies to accurately analyze and quantify changes in mitochondrial organization in a variety of cells and cellular contexts. Here we present an innovative computerized method that enables accurate, multiscale, fast and cost-effective analysis of mitochondrial shape and network architecture from confocal fluorescence images by providing more than thirty features. In order to facilitate interpretation of the quantitative results, we introduced two innovations: the use of Kiviat-graphs (herein named MitoSpider plots) to present highly multidimensional data and visualization of the various mito-cellular configurations in the form of morphospace diagrams (called MitoSigils). We tested our fully automated image analysis tool on rich datasets gathered from live normal human skin cells cultured under basal conditions or exposed to specific stress including UVB irradiation and pesticide exposure. We demonstrated the ability of our proprietary software (named MitoTouch) to sensitively discriminate between control and stressed dermal fibroblasts, and between normal fibroblasts and other cell types (including cancer tissue-derived fibroblasts and primary keratinocytes), showing that our automated analysis captures subtle differences in morphology. Based on this novel algorithm, we report the identification of a protective natural ingredient that mitigates the deleterious impact of hydrogen peroxide (H2O2) on mitochondrial organization. Hence we conceived a novel wet-plus-dry pipeline combining cell cultures, quantitative imaging and semiotic analysis for exhaustive analysis of mitochondrial morphology in living adherent cells. Our tool has potential for broader applications in other research areas such as cell biology and medicine, high-throughput drug screening as well as predictive and environmental toxicology.

Indexed as

Hydrogen PeroxideMitochondriaAlgorithmsHumansImage Processing, Computer-AssistedSoftwareHydrogen Peroxide

Identifiers

PMID38547143
PMCPMC10977735

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.