Evidence map›Paper›PMID 38546934›Full record

ArticleGenes & genomics2024

In silico identification and expression analyses of peroxidases in Tenebrio molitor.

Ho Am Jang, Sung Min Ku, Jae Hui Kim, Sang Mok Jung, Jongdae Lee, Yong Seok Lee, Yeon Soo Han, Yong Hun Jo

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Article in Genes & genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

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0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

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5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Ho Am Jang *Department of Biology, College of Natural Sciences, Soonchunhyang University, Asan, Chungnam, Republic of Korea.
Sung Min Ku *Department of Biology, College of Natural Sciences, Soonchunhyang University, Asan, Chungnam, Republic of Korea.
Jae Hui KimDepartment of Biology, College of Natural Sciences, Soonchunhyang University, Asan, Chungnam, Republic of Korea.
Sang Mok JungResearch Institute for Basic Science, Soonchunhyang University, Asan, Chungnam, Republic of Korea.
Jongdae LeeDepartment of Environmental Health Sciences, Soonchunhyang University, Asan, Chungnam, Republic of Korea.
Yong Seok LeeDepartment of Biology, College of Natural Sciences, Soonchunhyang University, Asan, Chungnam, Republic of Korea.
Yeon Soo HanDepartment of Applied Biology, Institute of Environmentally-Friendly Agriculture (IEFA), College of Agriculture and Life Sciences, Chonnam National University, Gwangju, 61186, Republic of Korea.
Yong Hun JoDepartment of Biology, College of Natural Sciences, Soonchunhyang University, Asan, Chungnam, Republic of Korea. yhun1228@sch.ac.kr.ORCID 0000-0002-9277-5772
Soonchunhyang University · KRChonnam National University · KR

Funding

National Research Foundation of Korea 2022R1A2C1013108National Research Foundation of Korea NRF-2021R1A6A1A03039503
6 · The paper itself

Abstract

Human advancements in agriculture, urbanization, and industrialization have led to various forms of environmental pollution, including heavy metal pollution. Insects, as highly adaptable organisms, can survive under various environmental stresses, which induce oxidative damage and impair antioxidant systems. To investigate the peroxidase (POX) family in Tenebrio molitor, we characterized two POXs, namely TmPOX-iso1 and TmPOX-iso2. The full-length cDNA sequences of TmPox-iso1 and TmPox-iso2 respectively consisted of an open reading frame of 1815 bp encoding 605 amino acids and an open reading frame of 2229 bp encoding 743 amino acids. TmPOX-iso1 and TmPOX-iso2 homologs were found in five distinct insect orders. In the phylogenetic tree analysis, TmPOX-iso1 was clustered with the predicted POX protein of T. castaneum, and TmPOX-iso2 was clustered with the POX precursor protein of T. castaneum. During development, the highest expression level of TmPox-iso1 was observed in the pre-pupal stage, while that of TmPox-iso2 expression were observed in the pre-pupal and 4-day pupal stages. TmPox-iso1 was primarily expressed in the early and late larval gut, while TmPox-iso2 mRNA expression was higher in the fat bodies and Malpighian tubules. In response to cadmium chloride treatment, TmPox-iso1 expression increased at 3 hours and then declined until 24 hours, while in the zinc chloride-treated group, TmPox-iso1 expression peaked 24 hours after the treatment. Both treated groups showed increases in TmPox-iso2 expression 24 hours after the treatments.

Indexed as

TenebrioAmino AcidsAnimalsHumansPeroxidasesPhylogenyProteinsAmino AcidsPeroxidasesProteinsDetoxificationDevelopmental stagesHeavy metalTenebrio molitorTissue specific

Identifiers

PMID38546934
OpenAlexW4393273562

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.