Evidence map›Paper›PMID 38545788›Full record

ArticleAnnals of surgery2024

ZIP Code to Genomic Code: Neighborhood Disadvantage, Aggressive Breast Cancer Biology, and Breast Cancer Outcomes.

Neha Goel, Alexandra E Hernandez, Michael H Antoni, Susan Kesmodel, Paulo S Pinheiro, Erin Kobetz, Nipun Merchant, Steve W Cole

Abstract read
In one paragraph

Article in Annals of surgery, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Fecal sample biobanking for breast cancer research focused on the gut microbiome.medRxiv : the preprint server for health sciences · 2025
    Article
  5. Distinct Sources of Social Adversity, Stress, and Coping Mechanisms among Patients with Breast Cancer to Identify Areas for Intervention.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2025
    Article
  6. Article
  7. Article
  8. Geospatial Genomics: Operationalizing Multilevel Conceptual Frameworks of Cancer Health Outcomes to Account for Gene-Person-Place Relationships.Journal of clinical oncology : official journal of the American Society of Clinical Oncology · 2025
    Article
  9. A Neighborhood-Level Hispanic Paradox: The Interaction among Hispanic Density, Neighborhood Disadvantage, and Survival in Patients with Breast Cancer.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2025
    Article
  10. Review
  11. Social Genomic Determinants of Health: Understanding the Molecular Pathways by Which Neighborhood Disadvantage Affects Cancer Outcomes.Journal of clinical oncology : official journal of the American Society of Clinical Oncology · 2024
    Review
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Neha GoelDepartment of Surgery, Division of Surgical Oncology, School of Medicine, University of Miami Miller, Miami, FL.
Alexandra E HernandezDepartment of Surgery, Division of Surgical Oncology, School of Medicine, University of Miami Miller, Miami, FL.
Michael H AntoniSylvester Comprehensive Cancer Center, School of Medicine, University of Miami Miller, Miami, FL.
Susan KesmodelDepartment of Surgery, Division of Surgical Oncology, School of Medicine, University of Miami Miller, Miami, FL.
Paulo S PinheiroDepartment of Public Health Sciences, School of Medicine, University of Miami Miller, Miami, FL.
Erin KobetzSylvester Comprehensive Cancer Center, School of Medicine, University of Miami Miller, Miami, FL.
Nipun MerchantDepartment of Surgery, Division of Surgical Oncology, School of Medicine, University of Miami Miller, Miami, FL.
Steve W ColeDepartment of Psychiatry/Biobehavioral Sciences and Medicine, School of Medicine, University of California Los Angeles David Geffen, Los Angeles, CA.
University of Miami · USHarvard University · USSylvester Comprehensive Cancer Center · USUniversity of California, Los Angeles · US

Funding

USC/UCLA Center on Biodemography &Population HealthP30AG017265 · NIA · UNIVERSITY OF SOUTHERN CALIFORNIA · PI JENNIFER A AILSHIRE · 1999 to 2026
$17.9M
UM Calabresi Clinical Oncology Research Career Development AwardK12CA226330 · NCI · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI Alan Pollack · 2018 to 2026
$5.1M
Culturally Adapted Cognitive Behavioral Stress and Self-Management (C-CBSM) Intervention for PCR01CA206456 · NCI · UNIVERSITY OF MIAMI CORAL GABLES · PI ANTONI, MICHAEL HOWARD, PENEDO, FRANK J · 2016 to 2021
$4.2M
Technology Facilitated Behavioral Intervention for Depression among Diverse Patients in Ambulatory OncologyR37CA255875 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI BETINA YANEZ · 2021 to 2026
$4.0M
Research Training Program in Surgical OncologyT32CA211034 · NCI · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI MERCHANT, NIPUN B. · 2016 to 2025
$2.7M
Avanzando Caminos (Leading Pathways): The Hispanic/Latino Cancer Survivorship Cohort Study.”UG3CA260317 · NCI · UNIVERSITY OF MIAMI CORAL GABLES · PI PENEDO, FRANK J, RAMIREZ, AMELIE G · 2021 to 2022
$2.0M
eHealth Supported Mindfulness-based Music Therapy Intervention (eMBMT) in Hemopoietic Stem Cell Transplant PatientsR61CA263335 · NCI · UNIVERSITY OF MIAMI CORAL GABLES · PI LESIUK, TERESA LYNN, PENEDO, FRANK J · 2022 to 2023
$866k
NCI NIH HHS K12 CA226330NCI NIH HHS R01 CA206456NCI NIH HHS R37 CA255875NCI NIH HHS R61 CA263335NCI NIH HHS T32 CA211034NCI NIH HHS UG3 CA260317NIA NIH HHS P30 AG017265
6 · The paper itself

Abstract

objectiveTo determine the association between objective (geospatial) and subjective (perceived) measures of neighborhood disadvantage (ND) and aggressive breast cancer tumor biology, defined using validated social adversity-associated transcription factor (TF) activity and clinical outcomes.

backgroundND is associated with shorter breast cancer recurrence-free survival (RFS), independent of individual, tumor, and treatment characteristics, suggesting potential unaccounted biological mechanisms by which ND influences RFS.

methodsWe quantified TF-binding motif prevalence within promoters of differentially expressed genes for 147 tissue samples prospectively collected on the protocol. Covariate-adjusted multivariable regression analyzed objective and subjective ND scores with 5 validated TFs of social adversity and aggressive biology-pro-inflammatory activity [nuclear factor-κB ( NF-kB ), activator protein 1 ( AP-1 )], sympathetic nervous system (SNS) activity [cyclic 3'-5' adenosine monophosphate response element-binding protein ( CREB )], and protective cellular responses [interferon-regulatory factor ( IRF ) and signal transducer and activator of transcription ( STAT )]. To clinically validate these TFs as prognostic biomarkers of aggressive biology, logistic regression and multivariable Cox proportional-hazards models analyzed their association with Oncotype DX scores and RFS, respectively.

resultsIncreasing objective ND was associated with aggressive tumor biology (up-regulated NF-kB , activator protein 1, down-regulated IRF , and signal transducer and activator of transcription) and SNS activation (up-regulated CREB ). Increasing subjective ND (eg, threat to safety) was associated with up-regulated NF-kB and CREB and down-regulated IRF . These TF patterns were associated with high-risk Oncotype DX scores and shorter RFS.

conclusionsIn the largest human social genomics study, objective and subjective ND were significantly associated with TFs of aggressive biology and SNS activation. These TFs also correlated with worse clinical outcomes, implicating SNS activation as one potential mechanism behind ND survival disparities. These findings remain to be validated in a national cohort.

Indexed as

Breast NeoplasmsAdultAgedBiomarkers, TumorFemaleHumansMiddle AgedPrognosisProspective StudiesResidence CharacteristicsTranscription FactorsBiomarkers, TumorTranscription Factors

Identifiers

PMID38545788
PMCPMC13634256
OpenAlexW4393265150

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.