Evidence map›Paper›PMID 38545600›Full record

ArticleComputational and structural biotechnology journal2024

Multi-omics analysis reveals the unique landscape of DLD in the breast cancer tumor microenvironment and its implications for immune-related prognosis.

Lijun Xu, Lei Yang, Dan Zhang, Yunxi Wu, Jiali Shan, Huixia Zhu, Zhengyi Lian, Guying He, Chongyu Wang, Qingqing Wang

Open access · goldAbstract read
In one paragraph

Article in Computational and structural biotechnology journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Elucidating the evolving role of cuproptosis in breast cancer progression.International journal of biological sciences · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Lijun XuDepartment of General Surgery, Affiliated Hospital of Nantong University, Medical School of Nantong University, Nantong, China.
Lei YangDepartment of Clinical Biobank & Institute of Oncology, Affiliated Hospital of Nantong University & Medical School of Nantong University, Nantong, China.
Dan ZhangDepartment of General Surgery, Affiliated Hospital of Nantong University, Medical School of Nantong University, Nantong, China.
Yunxi WuDepartment of General Surgery, Affiliated Hospital of Nantong University, Medical School of Nantong University, Nantong, China.
Jiali ShanDepartment of General Surgery, Affiliated Hospital of Nantong University, Medical School of Nantong University, Nantong, China.
Huixia ZhuDepartment of Biochemistry, Medical College, Nantong University, Nantong, China.
Zhengyi LianDepartment of General Surgery, Affiliated Hospital of Nantong University, Medical School of Nantong University, Nantong, China.
Guying HeDepartment of General Surgery, Affiliated Hospital of Nantong University, Medical School of Nantong University, Nantong, China.
Chongyu WangDepartment of Medicine, Xinglin College, Nantong University, Nantong, China.
Qingqing WangDepartment of General Surgery, Affiliated Hospital of Nantong University, Medical School of Nantong University, Nantong, China.
Nantong University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Cuproptosis, i.e., copper-induced programmed cell death, has potential implications in cancer therapy. However, the impact of the cuproptosis-related gene (CRG) dihydrolipoyl dehydrogenase (DLD) on breast cancer (BC) prognosis remains underexplored. Methods: We employed real-time quantitative PCR and multiplexed immunostaining techniques to quantify DLD expression in both BC and the adjacent non-cancerous tissues. Immunofluorescence analysis was employed to assess the influence of DLD on immune cells and immunological checkpoints in the BC microenvironment. DLD knockdown experiments were conducted in BC cell lines MDA-MB-468 and SK-BR-3, with knockdown efficiency validated via western blot. Subsequently, we performed the cell counting kit-8 (CCK-8) assay, clone formation assay, Transwell migration assay, and invasion assay. To construct a prognostic model, we employed a Lasso-Cox regression analysis of immune-related genes associated with DLD. Additionally, we established a competing endogenous RNA network based on CRGs to evaluate potential regulatory pathways. Results: Compared to the adjacent tissues, BC tissues exhibited markedly elevated DLD expression levels. In vitro experiments demonstrated that DLD knockdown effectively inhibited BC cell migration, invasion, and proliferation. DLD exhibited positive correlations with CD68 Conclusion: Our findings underscore the significant predictive significance of DLD in BC and its influence on the tumor microenvironment. DLD represents a promising diagnostic and prognostic marker for BC, offering novel avenues for the identification of therapeutic targets and the enhancement of immunotherapy in BC.

Indexed as

Breast cancerCuproptosisPrognostic modelTumor immune microenvironment

Identifiers

PMID38545600
PMCPMC10966406
OpenAlexW4392520030

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.