Evidence map›Paper›PMID 38545162›Full record

ArticleHeliyon2024

Nanopore-based metagenomics analysis reveals microbial presence in amniotic fluid: A prospective study.

Lihang Zhong, Yunjun Yan, Long Chen, Na Sun, Hongyan Li, Yuli Wang, Huijun Liu, Yifang Jia, Yurong Lu, Xuling Liu and 3 more

Open access · goldAbstract read
In one paragraph

Article in Heliyon, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Lihang ZhongDepartment of Obstetrics and Gynecology, Shandong Provincial Hospital, Shandong University, China.
Yunjun YanJinan Dian Medical Laboratory CO., LTD, Shandong, China.
Long ChenZhejiang Digena Diagnosis Technology CO., LTD, Zhejiang, China.
Na SunJinan Dian Medical Laboratory CO., LTD, Shandong, China.
Hongyan LiDepartment of Obstetrics and Gynecology, Shandong Provincial Hospital, Shandong University, China.
Yuli WangDepartment of Obstetrics and Gynecology, Shandong Provincial Hospital, Shandong University, China.
Huijun LiuDepartment of Obstetrics and Gynecology, Shandong Provincial Hospital, Shandong University, China.
Yifang JiaPrenatal Diagnosis Center of Shandong Provincial Hospital Affiliated to Shandong First Medical University, China.
Yurong LuDepartment of Obstetrics and Gynecology, Shandong Provincial Hospital, Shandong University, China.
Xuling LiuKey Laboratory of Digital Technology in Medical Diagnostics of Zhejiang Province, China.
Yu ZhangZhejiang Digena Diagnosis Technology CO., LTD, Zhejiang, China.
Huimin GuoZhejiang Digena Diagnosis Technology CO., LTD, Zhejiang, China.
Xietong WangDepartment of Obstetrics and Gynecology, Shandong Provincial Hospital, Shandong University, China.
Shandong Provincial Hospital · CNShandong University · CNDian Diagnostics (China) · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Current research on amniotic fluid (AF) microbiota yields contradictory data, necessitating an accurate, comprehensive, and scientifically rigorous evaluation. Objective: This study aimed to characterise the microbial features of AF and explore the correlation between microbial information and clinical parameters. Methods: 76 AF samples were collected in this prospective cohort study. Fourteen samples were utilised to establish the nanopore metagenomic sequencing methodology, whereas the remaining 62 samples underwent a final statistical analysis along with clinical information. Negative controls included the operating room environment (OE), surgical instruments (SI), and laboratory experimental processes (EP) to elucidate the background contamination at each step. Simultaneously, levels of five cytokines (IL-1β, IL-6, IL-8, TNF-α, MMP-8) in AF were assessed. Results: Among the 62 AF samples, microbial analysis identified seven without microbes and 55 with low microbial diversity and abundance. No significant clinical differences were observed between AF samples with and without microbes. The correlation between microbes and clinical parameters in AF with normal chromosomal structure revealed noteworthy findings. In particular, the third trimester exhibited richer microbial diversity. Conclusion: Most AF samples exhibited low microbial diversity and abundance. Certain microbes in AF may correlate with clinical parameters such as gestational age and PTB. However, these associations require further investigation. It is essential to expand the sample size and undertake more comprehensive research to elucidate the clinical implications of microbial presence in AF.

Indexed as

Amniotic fluidCytokinesMicrobesNanopore metagenomic sequencingPregnancy outcomes

Identifiers

PMID38545162
PMCPMC10966708
OpenAlexW4392962345

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.