Evidence map›Paper›PMID 38542418›Full record

ArticleInternational journal of molecular sciences2024

Integrative Kinase Activity Profiling and Phosphoproteomics of

Akanksha Roy, Jiaming Zhou, Merijn Nolet, Charlotte Welinder, Yu Zhu, François Paquet-Durand, John Groten, Tushar Tomar, Per Ekström

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it, 5 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Akanksha RoyPamGene International B.V., 5200 BJ 's-Hertogenbosch, The Netherlands.ORCID 0000-0002-9683-4020
Jiaming ZhouOphthalmology, Department of Clinical Sciences Lund, Faculty of Medicine, Lund University, 22362 Lund, Sweden.
Merijn NoletPamGene International B.V., 5200 BJ 's-Hertogenbosch, The Netherlands.
Charlotte WelinderMass Spectrometry, Department of Clinical Sciences Lund, Faculty of Medicine, Lund University, 22362 Lund, Sweden.ORCID 0000-0001-9626-0576
Yu ZhuCell Death Mechanism Group, Institute for Ophthalmic Research, Eberhard-Karls-Universität Tübingen, 72072 Tübingen, Germany.ORCID 0000-0003-2727-1356
François Paquet-DurandCell Death Mechanism Group, Institute for Ophthalmic Research, Eberhard-Karls-Universität Tübingen, 72072 Tübingen, Germany.ORCID 0000-0001-7355-5742
John GrotenPamGene International B.V., 5200 BJ 's-Hertogenbosch, The Netherlands.
Tushar TomarPamGene International B.V., 5200 BJ 's-Hertogenbosch, The Netherlands.ORCID 0000-0002-3344-7605
Per EkströmOphthalmology, Department of Clinical Sciences Lund, Faculty of Medicine, Lund University, 22362 Lund, Sweden.
Lund University · SEPamGene (Netherlands) · NLUniversity of Tübingen · DEFontys University of Applied Sciences · NL

Funding

European Union Horizon 2020 Research and Innovation Programme transMed 765441
6 · The paper itself

Abstract

Inherited retinal degenerative diseases (IRDs) are a group of rare diseases that lead to a progressive loss of photoreceptor cells and, ultimately, blindness. The overactivation of cGMP-dependent protein kinase G (PKG), one of the key effectors of cGMP-signaling, was previously found to be involved in photoreceptor cell death and was studied in murine IRD models to elucidate the pathophysiology of retinal degeneration. However, PKG is a serine/threonine kinase (STK) with several hundred potential phosphorylation targets and, so far, little is known about the specificity of the target interaction and downstream effects of PKG activation. Here, we carried out both the kinome activity and phosphoproteomic profiling of organotypic retinal explant cultures derived from the

Indexed as

Retinal DegenerationAnimalsCalmodulinCyclic GMPCyclic GMP-Dependent Protein KinasesMicePhosphorylationProtein Serine-Threonine KinasesRetinaCalmodulinCyclic GMPCyclic GMP-Dependent Protein KinasesProtein Serine-Threonine KinasesCaMKCREBkinome activity profilingphosphoproteomicsPKGrd10

Identifiers

PMID38542418
PMCPMC10970885
OpenAlexW4392961238

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.