ArticleInternational journal of molecular sciences2024
Transcriptome Sequencing Reveals the Mechanism of Auxin Regulation during Root Expansion in Carrot.
Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.
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Who cites it
5 citing papers in PubMed, 7 citations in OpenAlex.
- Salicylic acid exerts effects on regulating flower bud differentiation and nutrient contents in red radish.Frontiers in plant science · 2026Article
- Growth-Promoting Effects and Mechanisms of Synthetic Plant Growth-Promoting Rhizobacteria on Maize Seedlings.Microorganisms · 2025Article
- Tissue-Specific RNA-Seq Analysis of Cotton Roots' Response to Compound Saline-Alkali Stress and the Functional Validation of the Key GenePlants (Basel, Switzerland) · 2025Article
- Development and characterization of a complete set of monosomic alien addition lines from Raphanus sativus in Brassica oleracea.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- Transcriptomics integrated with targeted metabolomics reveals endogenous hormone changes in tuberous root expansion of Pueraria.BMC genomics · 2024Article
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Authors and funding
5 authors at 1 institution in 1 country.
Funding
Abstract
Carrot is an important vegetable with roots as the edible organ. A complex regulatory network controls root growth, in which auxin is one of the key players. To clarify the molecular mechanism on auxin regulating carrot root expansion, the growth process and the indole-3-acetic acid (IAA) content in the roots were measured in this experiment. It was found that the rapid expansion period of the root was from 34 to 41 days after sowing and the IAA content was the highest during this period. The root growth then slowed down and the IAA levels decreased. Using the transcriptome sequencing database, we analyzed the expression of IAA-metabolism-related genes and found that the expression of most of the IAA synthesis genes, catabolism genes, and genes related to signal transduction was consistent with the changes in IAA content during root expansion. Among them, a total of 31 differentially expressed genes (DEGs) were identified, including 10 IAA synthesis genes, 8 degradation genes, and 13 genes related to signal transduction. Analysis of the correlations between the DEGs and IAA levels showed that the following genes were closely related to root development: three synthesis genes,
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