Evidence map›Paper›PMID 38540741›Full record

ArticleBiomolecules2024

SOS-Inducing Drugs Trigger Nucleic Acid Release and Biofilm Formation in Gram-Negative Bacteria.

Peter Demjanenko, Sam Zheng, John K Crane

Open access · goldAbstract read
In one paragraph

Article in Biomolecules, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Peter DemjanenkoJacobs School of Medicine and Biomedical Sciences, University at Buffalo, Room 317 Biomedical Research Bldg., 3435 Main St., Buffalo, NY 14214, USA.
Sam ZhengJacobs School of Medicine and Biomedical Sciences, University at Buffalo, Room 317 Biomedical Research Bldg., 3435 Main St., Buffalo, NY 14214, USA.
John K CraneDivision of Infectious Diseases, Department of Medicine, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo, Room 317 Biomedical Research Bldg., 3435 Main St., Buffalo, NY 14214, USA.ORCID 0000-0002-1341-5665
University at Buffalo, State University of New York · US

Funding

Department of Internal Medicine, University at Buffalo 77548-20-1138250
6 · The paper itself

Abstract

Our laboratory recently reported that induction of the SOS response, triggered by SOS-inducing drugs, was accompanied by a large release of DNA from enteric bacteria. The SOS response release had not previously been reported to include release of extracellular DNA from bacterial cells. We followed up on those observations in this current study and found that not just double-stranded DNA was being released, but also single-stranded DNA, RNA, and protein. SOS-inducing drugs also triggered formation of biofilm at the air-fluid interface on glass, and the biofilms contained DNA. We extended our study to test whether inhibitors of the SOS response would block DNA release and found that SOS inhibitors, including zinc salts, nitric oxide donors, and dequalinium, inhibited SOS-induced DNA release. The understanding that SOS-induced DNA release is associated with formation of biofilms increases our appreciation of the role of the SOS response in pathogenesis, as well as in emergence of new antibiotic resistance. Our findings with SOS inhibitors also suggest that regimens might be devised that could block the deleterious effects of the SOS response, at least temporarily, when this is desired.

Indexed as

Nucleic AcidsBiofilmsDNAGram-Negative BacteriaSOS Response, GeneticsDNANucleic AcidsdequaliniumEscherichia coliKlebsiella pneumoniaenitric oxidePseudomonas aeruginosaRNASalmonella entericaShigella sonneisingle-stranded DNASOS responsezinc

Identifiers

PMID38540741
PMCPMC10967838
OpenAlexW4392588663

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.