Evidence map›Paper›PMID 38539996›Full record

ArticleAnimals : an open access journal from MDPI2024

Massively Parallel CRISPR-Cas9 Knockout Screening in Sheep Granulosa Cells for FSH Response Genes.

Zaixia Liu, Lingli Dai, Tianhao Sun, Yongbin Liu, Yanchun Bao, Mingjuan Gu, Shaoyin Fu, Xiaolong He, Caixia Shi, Yu Wang and 5 more

Open access · goldAbstract read
In one paragraph

Article in Animals : an open access journal from MDPI, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

Zaixia LiuCollege of Animal Science, Inner Mongolia Agricultural University, Hohhot 010018, China.ORCID 0000-0002-5093-9193
Lingli DaiCollege of Animal Science, Inner Mongolia Agricultural University, Hohhot 010018, China.
Tianhao SunSchool of Life Science, Inner Mongolia University, Hohhot 010021, China.
Yongbin LiuSchool of Life Science, Inner Mongolia University, Hohhot 010021, China.
Yanchun BaoCollege of Animal Science, Inner Mongolia Agricultural University, Hohhot 010018, China.
Mingjuan GuCollege of Animal Science, Inner Mongolia Agricultural University, Hohhot 010018, China.
Shaoyin FuInstitute of Animal Husbandry, Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, Hohhot 010031, China.
Xiaolong HeInstitute of Animal Husbandry, Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, Hohhot 010031, China.
Caixia ShiCollege of Animal Science, Inner Mongolia Agricultural University, Hohhot 010018, China.
Yu WangCollege of Veterinary Medicine, Inner Mongolia Agricultural University, Hohhot 010018, China.
Lili GuoInner Mongolia Engineering Research Center of Genomic Big Data for Agriculture, Hohhot 010018, China.
Le ZhouCollege of Animal Science, Inner Mongolia Agricultural University, Hohhot 010018, China.
Fengying MaCollege of Animal Science, Inner Mongolia Agricultural University, Hohhot 010018, China.
Risu NaCollege of Animal Science, Inner Mongolia Agricultural University, Hohhot 010018, China.
Wenguang ZhangCollege of Animal Science, Inner Mongolia Agricultural University, Hohhot 010018, China.
Inner Mongolia Agricultural University · CNAnimal Science Research Institute · CNInner Mongolia University · CN

Funding

Basic research expenses of universities directly under the Inner Mongolia Autonomous Region No. BR221024Inner Mongolia "Unveiling and Commanding" system No. 2022JBGS0025Modern Agricultural Industry Technology System of China CARS-38National Natural Science Foundation of China No.32360813the Science and Technology Major Project of Inner Mongolia No. 2021ZD0009, No. 2019ZD016
6 · The paper itself

Abstract

Follicle-stimulating hormone (FSH) regulates ovarian follicle development through specific gene expression programs. Granulosa cells (GCs) are somatic cells surrounding the oocytes, secreting gonadotropins to regulate ovulation and promote follicular development. By analyzing the effects of different doses of FSH on the proliferation of GCs, we found that adding 10 ng/mL of FSH, as the optimal concentration, could promote the growth of GCs. Furthermore, we have successfully constructed the first CRISPR-Cas9 knockout library targeting the genes on chromosomes 2 and 3 and the X chromosomes of the sheep massively parallel coding gene, as well as an ovarian GCs knockout cell library. For the first time, we have exposed the knockout cell library to a concentration of 10 ng/mL FSH to explore the underlying mechanisms. Through this screening, we have identified 836 positive-negative screening genes that are responsive to FSH, thereby revealing the regulatory mechanisms and screening the functionality of candidate genes. Next, RNA-Seq of control (0 ng/mL), low (10 ng/mL), and high (100 ng/mL) doses of FSH revealed 1708 differentially expressed genes, and combined with 836 genes, we obtained 129 FSH dose-dependent genes with extremely significant differences. This enables us to delve deeper into investigating and identifying the mechanisms by which FSH regulates GCs. More generally, we have discovered new regulatory factors and identified reproductivity-associated major effectors. These findings provide novel research directions for further studies on sheep reproduction.

Indexed as

dose-dependent genesFSHgranulosa cellsmassively parallel CRISPR-Cas9 library

Identifiers

PMID38539996
PMCPMC10967520
OpenAlexW4392861859

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.