Evidence map›Paper›PMID 38538798›Full record

ArticleNature2024

Targeting DCAF5 suppresses SMARCB1-mutant cancer by stabilizing SWI/SNF.

Sandi Radko-Juettner, Hong Yue, Jacquelyn A Myers, Raymond D Carter, Alexis N Robertson, Priya Mittal, Zhexin Zhu, Baranda S Hansen, Katherine A Donovan, Moritz Hunkeler and 16 more

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Nature, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
11.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 51 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

26 authors at 5 institutions in 1 country.

Sandi Radko-Juettner *Division of Molecular Oncology, Department of Oncology, St Jude Children's Research Hospital, Memphis, TN, USA.
Hong Yue *Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, USA.
Jacquelyn A MyersDivision of Molecular Oncology, Department of Oncology, St Jude Children's Research Hospital, Memphis, TN, USA.
Raymond D CarterDivision of Molecular Oncology, Department of Oncology, St Jude Children's Research Hospital, Memphis, TN, USA.ORCID 0000-0002-9226-9159
Alexis N RobertsonDivision of Molecular Oncology, Department of Oncology, St Jude Children's Research Hospital, Memphis, TN, USA.
Priya MittalDivision of Molecular Oncology, Department of Oncology, St Jude Children's Research Hospital, Memphis, TN, USA.
Zhexin ZhuDivision of Molecular Oncology, Department of Oncology, St Jude Children's Research Hospital, Memphis, TN, USA.
Baranda S HansenDepartment of Cell and Molecular Biology, St Jude Children's Research Hospital, Memphis, TN, USA.ORCID 0000-0003-2299-650X
Katherine A DonovanDepartment of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID 0000-0002-8539-5106
Moritz HunkelerDepartment of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID 0000-0003-0246-1188
Wojciech RosikiewiczCenter for Applied Bioinformatics, St Jude Children's Research Hospital, Memphis, TN, USA.ORCID 0000-0001-7031-3430
Zhiping WuDepartment of Structural Biology, St Jude Children's Research Hospital, Memphis, TN, USA.
Meghan G McReynoldsDepartment of Structural Biology, St Jude Children's Research Hospital, Memphis, TN, USA.ORCID 0000-0001-7249-6314
Shourya S Roy BurmanDepartment of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID 0000-0001-9274-9104
Anna M SchmokerDepartment of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, USA.
Nada MageedDepartment of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID 0009-0005-0046-6104
Scott A BrownDepartment of Immunology, St Jude Children's Research Hospital, Memphis, TN, USA.
Robert J MobleyDivision of Molecular Oncology, Department of Oncology, St Jude Children's Research Hospital, Memphis, TN, USA.
Janet F PartridgeDivision of Molecular Oncology, Department of Oncology, St Jude Children's Research Hospital, Memphis, TN, USA.ORCID 0000-0003-1102-6305
Elizabeth A StewartDepartment of Developmental Neurobiology, St Jude Children's Research Hospital, Memphis, TN, USA.ORCID 0000-0001-8005-0427
Shondra M Pruett-MillerDepartment of Cell and Molecular Biology, St Jude Children's Research Hospital, Memphis, TN, USA.ORCID 0000-0002-3793-585X
Behnam NabetHuman Biology Division, Fred Hutchinson Cancer Center, Seattle, WA, USA.ORCID 0000-0002-6738-4200
Junmin PengDepartment of Structural Biology, St Jude Children's Research Hospital, Memphis, TN, USA.ORCID 0000-0003-0472-7648
Nathanael S GrayDepartment of Chemical and Systems Biology, ChEM-H, Stanford Cancer Institute, Stanford Medicine, Stanford, CA, USA.ORCID 0000-0001-5354-7403
Eric S FischerDepartment of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, USA. eric_fischer@dfci.harvard.edu.ORCID 0000-0001-7337-6306
Charles W M RobertsDivision of Molecular Oncology, Department of Oncology, St Jude Children's Research Hospital, Memphis, TN, USA. charles.roberts@stjude.org.ORCID 0000-0003-1135-1896
St. Jude Children's Research Hospital · USHarvard University · USDana-Farber Cancer Institute · USFred Hutch Cancer Center · USStanford Medicine · US

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI GERARD PAUL ZAMBETTI · 1985 to 2026
$166.9M
THE FUNCTION OF SNF5 (SMARCB1), AN EPIGENETIC TUMOR SUPPRESSORR01CA113794 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 2005 to 2026
$7.8M
Dissecting neuron-microglia-astrocyte interaction in AD pathogenesisRF1AG068581 · NIA · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI PENG, JUNMIN, ROSSOLL, WILFRIED · 2020 to 2023
$5.4M
Role of the SWI/SNF complex in tumor suppressionR01CA172152 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 2013 to 2026
$5.1M
Development of a generalizable chemo-proteomics screening platform for small molecule degraders applied to HDACsR01CA262188 · NCI · DANA-FARBER CANCER INST · PI FISCHER, ERIC SEBASTIAN · 2022 to 2025
$1.8M
Cancer-based discovery of novel mechanisms of chromatin controlR01CA273455 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 2023 to 2026
$1.6M
Targeted disruption of the YAP/TAZ/TEAD axis in pancreatic cancerK22CA258805 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI NABET, BEHNAM · 2021 to 2024
$644k
Mechanistic Studies of a Novel Vulnerability in Pediatric CancerF31CA261150 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL GRADUATE SCHOOL OF BIOMEDICAL SCIENCES, LLC · PI RADKO-JUETTNER, SANDI · 2021 to 2022
$87k
NCI NIH HHS F31 CA261150NCI NIH HHS K22 CA258805NCI NIH HHS P30 CA021765NCI NIH HHS R01 CA113794NCI NIH HHS R01 CA172152NCI NIH HHS R01 CA262188NCI NIH HHS R01 CA273455NIA NIH HHS RF1 AG068581
6 · The paper itself

Abstract

Whereas oncogenes can potentially be inhibited with small molecules, the loss of tumour suppressors is more common and is problematic because the tumour-suppressor proteins are no longer present to be targeted. Notable examples include SMARCB1-mutant cancers, which are highly lethal malignancies driven by the inactivation of a subunit of SWI/SNF (also known as BAF) chromatin-remodelling complexes. Here, to generate mechanistic insights into the consequences of SMARCB1 mutation and to identify vulnerabilities, we contributed 14 SMARCB1-mutant cell lines to a near genome-wide CRISPR screen as part of the Cancer Dependency Map Project

Indexed as

Multiprotein ComplexesMutationNeoplasmsSMARCB1 ProteinAnimalsCell Line, TumorCRISPR-Cas SystemsFemaleGene EditingHumansMaleMiceProteolysisTumor Suppressor ProteinsUbiquitinMultiprotein ComplexesSMARCB1 ProteinSMARCB1 protein, humanTumor Suppressor ProteinsUbiquitin

Identifiers

PMID38538798
PMCPMC11184678
OpenAlexW4393234959

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.