Evidence map›Paper›PMID 38538783›Full record

ArticleNature2024

The complex polyploid genome architecture of sugarcane.

A L Healey, O Garsmeur, J T Lovell, S Shengquiang, A Sreedasyam, J Jenkins, C B Plott, N Piperidis, N Pompidor, V Llaca and 26 more

Open access · hybridAbstract read
In one paragraph

Article in Nature, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 94 papers.

0numbers the graph read from it
0cells of the map it votes in
94citing papers in PubMed
92.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

94 citing papers in PubMed, 155 citations in OpenAlex.

  1. Review
  2. Article
  3. Plasticity of metabolism in plants.The Plant journal : for cell and molecular biology · 2026
    Review
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  12. Adaptive Responses of Tropical Crops: A Multi-Scale Omics Integrated Perspective.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  13. Article
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  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. A sorghum-anchored pan-grass syntenic gene set in grasses.NAR genomics and bioinformatics · 2026
    Article

34 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

36 authors at 10 institutions in 5 countries.

A L HealeyGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA. ahealey@hudsonalpha.org.ORCID 0000-0002-3088-6856
O GarsmeurCIRAD, UMR AGAP Institut, Montpellier, France.
J T LovellGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.ORCID 0000-0002-8938-1166
S ShengquiangDepartment of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.ORCID 0000-0002-4336-8994
A SreedasyamGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.ORCID 0000-0001-7336-7012
J JenkinsGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.ORCID 0000-0002-7943-3997
C B PlottGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.ORCID 0000-0002-0109-5174
N PiperidisSugar Research Australia, Te Kowai, Queensland, Australia.ORCID 0000-0002-7880-7870
N PompidorCIRAD, UMR AGAP Institut, Montpellier, France.
V LlacaCorteva Agriscience, Johnston, IA, USA.ORCID 0000-0003-4822-2924
C J MetcalfeCSIRO Agriculture and Food, Queensland Bioscience Precinct, St Lucia, Queensland, Australia.ORCID 0000-0001-9375-3332
J DoleželInstitute of Experimental Botany of the Czech Academy of Sciences, Centre of Plant Structural and Functional Genomics, Olomouc, Czech Republic.ORCID 0000-0002-6263-0492
P CápalInstitute of Experimental Botany of the Czech Academy of Sciences, Centre of Plant Structural and Functional Genomics, Olomouc, Czech Republic.
J W CarlsonDepartment of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
J Y HoarauCIRAD, UMR AGAP Institut, Montpellier, France.ORCID 0000-0001-9734-4165
C HervouetCIRAD, UMR AGAP Institut, Montpellier, France.ORCID 0009-0000-5225-7244
C ZiniCIRAD, UMR AGAP Institut, Montpellier, France.
A DievartCIRAD, UMR AGAP Institut, Montpellier, France.ORCID 0000-0001-9460-4638
A LipzenDepartment of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
M WilliamsGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.
L B BostonGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.
J WebberGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.
K KeymaneshDepartment of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
S TejomurthulaDepartment of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
S RajasekarArizona Genomics Institute, University of Arizona, Tucson, AZ, USA.
R SucheckiCSIRO Agriculture and Food, Urrbrae, South Australia, Australia.ORCID 0000-0003-4992-9497
A FurtadoQueensland Alliance for Agriculture and Food Innovation, University of Queensland, Brisbane, Queensland, Australia.ORCID 0000-0001-6130-9026
G MayCorteva Agriscience, Johnston, IA, USA.
P ParakkalCorteva Agriscience, Johnston, IA, USA.
B A SimmonsQueensland Alliance for Agriculture and Food Innovation, University of Queensland, Brisbane, Queensland, Australia.ORCID 0000-0002-1332-1810
K BarryDepartment of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.ORCID 0000-0002-8999-6785
R J HenryQueensland Alliance for Agriculture and Food Innovation, University of Queensland, Brisbane, Queensland, Australia.ORCID 0000-0002-4060-0292
J GrimwoodGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.ORCID 0000-0002-8356-8325
K S AitkenCSIRO Agriculture and Food, Queensland Bioscience Precinct, St Lucia, Queensland, Australia.ORCID 0000-0003-4372-0721
J SchmutzGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA. jschmutz@hudsonalpha.org.ORCID 0000-0001-8062-9172
A D'HontCIRAD, UMR AGAP Institut, Montpellier, France. dhont@cirad.fr.ORCID 0000-0002-5318-921X
Lawrence Berkeley National Laboratory · USHudsonAlpha Institute for Biotechnology · USCentre de Coopération Internationale en Recherche Agronomique pour le Développement · FRCommonwealth Scientific and Industrial Research Organisation · AUCorteva (United States) · USCzech Academy of Sciences, Institute of Experimental Botany · CZAustralian Research Council · AUSugar Research Australia (Australia) · AUThe University of Queensland · AUUniversity of Arizona · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sugarcane, the world's most harvested crop by tonnage, has shaped global history, trade and geopolitics, and is currently responsible for 80% of sugar production worldwide

Indexed as

Genome, PlantPolyploidySaccharumBiotechnologyChromosomes, PlantDNA, PlantHaplotypesHybridization, GeneticPlant BreedingReference StandardsDNA, Plant

Identifiers

PMID38538783
PMCPMC11041754
OpenAlexW4393219011

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.