Evidence map›Paper›PMID 38538774›Full record

ArticleScientific reports2024

Utilizing adaptive deformable convolution and position embedding for colon polyp segmentation with a visual transformer.

Mohamed Yacin Sikkandar, Sankar Ganesh Sundaram, Ahmad Alassaf, Ibrahim AlMohimeed, Khalid Alhussaini, Adham Aleid, Salem Ali Alolayan, P Ramkumar, Meshal Khalaf Almutairi, S Sabarunisha Begum

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In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Mohamed Yacin SikkandarDepartment of Medical Equipment Technology, College of Applied Medical Sciences, Majmaah University, Al Majmaah, 11952, Saudi Arabia. m.sikkandar@mu.edu.sa.
Sankar Ganesh SundaramDepartment of Artificial Intelligence and Data Science, KPR Institute of Engineering and Technology, Coimbatore, 641407, India.
Ahmad AlassafDepartment of Medical Equipment Technology, College of Applied Medical Sciences, Majmaah University, Al Majmaah, 11952, Saudi Arabia.
Ibrahim AlMohimeedDepartment of Medical Equipment Technology, College of Applied Medical Sciences, Majmaah University, Al Majmaah, 11952, Saudi Arabia.
Khalid AlhussainiDepartment of Biomedical Technology, College of Applied Medical Sciences, King Saud University, Riyadh, 12372, Saudi Arabia.
Adham AleidDepartment of Biomedical Technology, College of Applied Medical Sciences, King Saud University, Riyadh, 12372, Saudi Arabia.
Salem Ali AlolayanDepartment of Medical Equipment Technology, College of Applied Medical Sciences, Majmaah University, Al Majmaah, 11952, Saudi Arabia.
P RamkumarDepartment of Computer Science and Engineering, Sri Sairam College of Engineering, Anekal, Bengaluru, 562106, Karnataka, India.
Meshal Khalaf AlmutairiDepartment of Medical Equipment Technology, College of Applied Medical Sciences, Majmaah University, Al Majmaah, 11952, Saudi Arabia.
S Sabarunisha BegumDepartment of Biotechnology, P.S.R. Engineering College, Sivakasi, 626140, India.

Funding

King Salman Center for Disability Research through Research Group Number KSRG-2023-339
6 · The paper itself

Abstract

Polyp detection is a challenging task in the diagnosis of Colorectal Cancer (CRC), and it demands clinical expertise due to the diverse nature of polyps. The recent years have witnessed the development of automated polyp detection systems to assist the experts in early diagnosis, considerably reducing the time consumption and diagnostic errors. In automated CRC diagnosis, polyp segmentation is an important step which is carried out with deep learning segmentation models. Recently, Vision Transformers (ViT) are slowly replacing these models due to their ability to capture long range dependencies among image patches. However, the existing ViTs for polyp do not harness the inherent self-attention abilities and incorporate complex attention mechanisms. This paper presents Polyp-Vision Transformer (Polyp-ViT), a novel Transformer model based on the conventional Transformer architecture, which is enhanced with adaptive mechanisms for feature extraction and positional embedding. Polyp-ViT is tested on the Kvasir-seg and CVC-Clinic DB Datasets achieving segmentation accuracies of 0.9891 ± 0.01 and 0.9875 ± 0.71 respectively, outperforming state-of-the-art models. Polyp-ViT is a prospective tool for polyp segmentation which can be adapted to other medical image segmentation tasks as well due to its ability to generalize well.

Indexed as

PolypsAmbulatory Care FacilitiesColonDiagnostic ErrorsElectric Power SuppliesHumansImage Processing, Computer-AssistedDeformable convolutionPolyp segmentationVision transformer

Identifiers

PMID38538774
PMCPMC11377543

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.