Evidence map›Paper›PMID 38538603›Full record

ArticleNature communications2024

Synaptically-targeted long non-coding RNA SLAMR promotes structural plasticity by increasing translation and CaMKII activity.

Isabel Espadas, Jenna L Wingfield, Yoshihisa Nakahata, Kaushik Chanda, Eddie Grinman, Ilika Ghosh, Karl E Bauer, Bindu Raveendra, Michael A Kiebler, Ryohei Yasuda and 2 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
6.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

  • Update of
    2023
5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Isabel Espadas *Department of Neuroscience, The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology, Jupiter, FL, USA.ORCID http://orcid.org/0000-0002-9811-9717
Jenna L Wingfield *Department of Neuroscience, The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology, Jupiter, FL, USA.
Yoshihisa NakahataMax Planck Florida Institute for Neuroscience, Jupiter, FL, USA.ORCID http://orcid.org/0000-0003-3403-4527
Kaushik ChandaDepartment of Neuroscience, The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology, Jupiter, FL, USA.ORCID http://orcid.org/0000-0002-8600-5210
Eddie GrinmanDepartment of Neuroscience, The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology, Jupiter, FL, USA.
Ilika GhoshMax Planck Florida Institute for Neuroscience, Jupiter, FL, USA.ORCID http://orcid.org/0000-0001-5997-5986
Karl E BauerBiomedical Center, Department for Cell Biology, Ludwig-Maximilians-University of Munich, Medical Faculty, 82152, Planegg-Martinsried, Germany.
Bindu RaveendraDepartment of Neuroscience, The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology, Jupiter, FL, USA.
Michael A KieblerBiomedical Center, Department for Cell Biology, Ludwig-Maximilians-University of Munich, Medical Faculty, 82152, Planegg-Martinsried, Germany.ORCID http://orcid.org/0000-0002-8850-6297
Ryohei YasudaMax Planck Florida Institute for Neuroscience, Jupiter, FL, USA.ORCID http://orcid.org/0000-0001-6263-9297
Vidhya RangarajuMax Planck Florida Institute for Neuroscience, Jupiter, FL, USA.ORCID http://orcid.org/0000-0002-6716-4312
Sathyanarayanan PuthanveettilDepartment of Neuroscience, The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology, Jupiter, FL, USA. sputhanveettil@ufl.edu.ORCID http://orcid.org/0000-0002-1302-6766
The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & TechnologyMax Planck Florida Institute for Neuroscience · USLudwig-Maximilians-Universität München · DEScripps Research Institute · US

Funding

Neuronal Intracellular Signaling Underlying Synaptic, Circuit and Behavioral PlasticityR35NS116804 · NINDS · MAX PLANCK FLORIDA CORPORATION · PI Ryohei Yasuda · 2020 to 2026
$7.8M
Mechanisms of Ras Signaling in Single SynapsesR01MH080047 · NIMH · MAX PLANCK FLORIDA CORPORATION · PI YASUDA, RYOHEI · 2007 to 2023
$6.8M
Transcriptomic Mechanisms of Formation and Persistence of Synapse Specific Long-Term MemoryR01MH119541 · NIMH · UNIVERSITY OF FLORIDA · PI PUTHANVEETTIL, SATHYA · 2019 to 2023
$2.7M
Axonal Transport and Long-Term Memory StorageR01MH094607 · NIMH · SCRIPPS FLORIDA · PI PUTHANVEETTIL, SATHYA · 2014 to 2018
$2.3M
Hippocampal IncRNAs and Memory ConsolidationR21DA039417 · NIDA · SCRIPPS FLORIDA · PI PUTHANVEETTIL, SATHYA · 2016 to 2017
$528k
Novel role of mitotic kinesin KIF11 in structural plasticity and memoryF32MH131420 · NIMH · UNIVERSITY OF FLORIDA · PI WINGFIELD, JENNA LYNNE · 2022 to 2023
$139k
NIDA NIH HHS R21 DA039417NIMH NIH HHS F32 MH131420NIMH NIH HHS R01 MH080047NIMH NIH HHS R01 MH094607NIMH NIH HHS R01 MH119541NINDS NIH HHS R35 NS116804
6 · The paper itself

Abstract

Long noncoding RNAs (lncRNAs) play crucial roles in maintaining cell homeostasis and function. However, it remains largely unknown whether and how neuronal activity impacts the transcriptional regulation of lncRNAs, or if this leads to synapse-related changes and contributes to the formation of long-term memories. Here, we report the identification of a lncRNA, SLAMR, which becomes enriched in CA1-hippocampal neurons upon contextual fear conditioning but not in CA3 neurons. SLAMR is transported along dendrites via the molecular motor KIF5C and is recruited to the synapse upon stimulation. Loss of function of SLAMR reduces dendritic complexity and impairs activity-dependent changes in spine structural plasticity and translation. Gain of function of SLAMR, in contrast, enhances dendritic complexity, spine density, and translation. Analyses of the SLAMR interactome reveal its association with CaMKIIα protein through a 220-nucleotide element also involved in SLAMR transport. A CaMKII reporter reveals a basal reduction in CaMKII activity with SLAMR loss-of-function. Furthermore, the selective loss of SLAMR function in CA1 disrupts the consolidation of fear memory in male mice, without affecting their acquisition, recall, or extinction, or spatial memory. Together, these results provide new molecular and functional insight into activity-dependent changes at the synapse and consolidation of contextual fear.

Indexed as

RNA, Long NoncodingAnimalsCalcium-Calmodulin-Dependent Protein Kinase Type 2HippocampusMaleMental RecallMiceMice, Inbred C57BLNeuronal PlasticityNeuronsCalcium-Calmodulin-Dependent Protein Kinase Type 2RNA, Long Noncoding

Identifiers

PMID38538603
PMCPMC10973417
OpenAlexW4393220414

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.