Evidence map›Paper›PMID 38537644›Full record

ArticleCell reports2024

The soil microbiome modulates the sorghum root metabolome and cellular traits with a concomitant reduction of Striga infection.

Dorota Kawa, Benjamin Thiombiano, Mahdere Z Shimels, Tamera Taylor, Aimee Walmsley, Hannah E Vahldick, Dominika Rybka, Marcio F A Leite, Zayan Musa, Alexander Bucksch and 10 more

Abstract read
In one paragraph

Article in Cell reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Unlocking the power ofmSystems · 2026
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  12. Microbial drivers of root plasticity.The New phytologist · 2025
    Review
  13. Review
  14. Article
  15. Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Dorota KawaDepartment of Plant Biology and Genome Center, University of California, Davis, Davis, CA 95616, USA; Plant Stress Resilience, Department of Biology, Utrecht University, 3508 TC Utrecht, the Netherlands; Environmental and Computational Plant Development, Department of Biology, Utrecht University, 3508 TC Utrecht, the Netherlands. Electronic address: dkawa@uu.nl.
Benjamin ThiombianoPlant Hormone Biology Group, Green Life Sciences Cluster, Swammerdam Institute for Life Science, University of Amsterdam, 1098 XH Amsterdam, the Netherlands.
Mahdere Z ShimelsNetherlands Institute of Ecology (NIOO-KNAW), Department of Microbial Ecology, 6708 PB Wageningen, the Netherlands.
Tamera TaylorDepartment of Plant Biology and Genome Center, University of California, Davis, Davis, CA 95616, USA; Plant Biology Graduate Group, University of California, Davis, Davis, CA 95616, USA.
Aimee WalmsleyPlant Hormone Biology Group, Green Life Sciences Cluster, Swammerdam Institute for Life Science, University of Amsterdam, 1098 XH Amsterdam, the Netherlands.
Hannah E VahldickDepartment of Plant Biology and Genome Center, University of California, Davis, Davis, CA 95616, USA.
Dominika RybkaNetherlands Institute of Ecology (NIOO-KNAW), Department of Microbial Ecology, 6708 PB Wageningen, the Netherlands.
Marcio F A LeiteNetherlands Institute of Ecology (NIOO-KNAW), Department of Microbial Ecology, 6708 PB Wageningen, the Netherlands.
Zayan MusaDepartment of Plant Biology and Genome Center, University of California, Davis, Davis, CA 95616, USA.
Alexander BuckschDepartment of Plant Biology, University of Georgia, Athens, GA 30602, USA; Institute of Bioinformatics, University of Georgia, Athens, GA 30602, USA; Warnell School of Forestry and Natural Resources, University of Georgia, Athens, GA 30602, USA.
Francisco Dini-AndreoteNetherlands Institute of Ecology (NIOO-KNAW), Department of Microbial Ecology, 6708 PB Wageningen, the Netherlands; Department of Plant Science, The Pennsylvania State University, University Park, PA 16802, USA; Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, PA 16802, USA.
Mario SchilderPlant Hormone Biology Group, Green Life Sciences Cluster, Swammerdam Institute for Life Science, University of Amsterdam, 1098 XH Amsterdam, the Netherlands.
Alexander J ChenDepartment of Plant Biology and Genome Center, University of California, Davis, Davis, CA 95616, USA.
Jiregna DaksaDepartment of Plant Biology and Genome Center, University of California, Davis, Davis, CA 95616, USA.
Desalegn W EtaloNetherlands Institute of Ecology (NIOO-KNAW), Department of Microbial Ecology, 6708 PB Wageningen, the Netherlands; Wageningen University and Research, Laboratory of Phytopathology, Wageningen, the Netherlands.
Taye TessemaEthiopian Institute of Agricultural Research, 3G53+6XC Holeta, Ethiopia.
Eiko E KuramaeNetherlands Institute of Ecology (NIOO-KNAW), Department of Microbial Ecology, 6708 PB Wageningen, the Netherlands; Ecology and Biodiversity, Department of Biology, Utrecht University, 3584 CH Utrecht, the Netherlands.
Jos M RaaijmakersNetherlands Institute of Ecology (NIOO-KNAW), Department of Microbial Ecology, 6708 PB Wageningen, the Netherlands.
Harro BouwmeesterPlant Hormone Biology Group, Green Life Sciences Cluster, Swammerdam Institute for Life Science, University of Amsterdam, 1098 XH Amsterdam, the Netherlands.
Siobhan M BradyDepartment of Plant Biology and Genome Center, University of California, Davis, Davis, CA 95616, USA. Electronic address: sbrady@ucdavis.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sorghum bicolor is among the most important cereals globally and a staple crop for smallholder farmers in sub-Saharan Africa. Approximately 20% of sorghum yield is lost annually in Africa due to infestation with the root parasitic weed Striga hermonthica. Existing Striga management strategies are not singularly effective and integrated approaches are needed. Here, we demonstrate the functional potential of the soil microbiome to suppress Striga infection in sorghum. We associate this suppression with microbiome-mediated induction of root endodermal suberization and aerenchyma formation and with depletion of haustorium-inducing factors, compounds required for the initial stages of Striga infection. We further identify specific bacterial taxa that trigger the observed Striga-suppressive traits. Collectively, our study describes the importance of the soil microbiome in the early stages of root infection by Striga and pinpoints mechanisms of Striga suppression. These findings open avenues to broaden the effectiveness of integrated Striga management practices.

Indexed as

MicrobiotaPlant RootsSoil MicrobiologySorghumStrigaMetabolomePlant DiseasesaerenchymaArthrobacterCP: MicrobiologyCP: Plantshaustorium-inducing factorsparasitic plantsPseudomonassorghumsuberin

Identifiers

PMID38537644
PMCPMC11063626

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.