Evidence map›Paper›PMID 38535849›Full record

ArticleVeterinary sciences2024

Comparative Analysis of the Ovary Transcriptome among Wanyue Black and Yorkshire Gilts Using RNA-Seq.

Huibin Zhang, Shuo Chen, Yangguang Liu, Fan Xie, Haoyu Wen, Shiming Zhao, Xianrui Zheng, Yueyun Ding, Zongjun Yin, Xiaodong Zhang

Open access · goldAbstract read
In one paragraph

Article in Veterinary sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Huibin ZhangCollege of Animal Science and Technology, Anhui Agricultural University, Hefei 230036, China.ORCID 0000-0002-4626-1236
Shuo ChenCollege of Animal Science and Technology, Anhui Agricultural University, Hefei 230036, China.
Yangguang LiuCollege of Animal Science and Technology, Anhui Agricultural University, Hefei 230036, China.
Fan XieCollege of Animal Science and Technology, Anhui Agricultural University, Hefei 230036, China.
Haoyu WenCollege of Animal Science and Technology, Anhui Agricultural University, Hefei 230036, China.
Shiming ZhaoCollege of Animal Science and Technology, Anhui Agricultural University, Hefei 230036, China.
Xianrui ZhengCollege of Animal Science and Technology, Anhui Agricultural University, Hefei 230036, China.
Yueyun DingCollege of Animal Science and Technology, Anhui Agricultural University, Hefei 230036, China.
Zongjun YinCollege of Animal Science and Technology, Anhui Agricultural University, Hefei 230036, China.
Xiaodong ZhangCollege of Animal Science and Technology, Anhui Agricultural University, Hefei 230036, China.
Anhui Agricultural University · CN

Funding

National Key Research and Development Program of China 2021YFD1301200National Natural Science Foundation of China 31972531the Cooperative Innovation Project of Anhui provincial universities GXXT-2021-055the Joint Research Project on Local Pig breeding in Anhui Province 340000211260001000431the Major special science and technology project of Anhui Province 202103a06020013
6 · The paper itself

Abstract

Pubertal genetic variations between the indigenous Chinese Wanyue Black pig breed and the imported Yorkshire breed significantly impact their reproductive capacity. In order to identify the differentially expressed genes, gene networks, and metabolic pathways in ovary transcriptome of gilts, the serum hormone levels were analyzed by ELISA, and RNA-seq was performed to analyze ovarian genes. Our results reveal higher estradiol (E2) levels in Wanyue black gilts compared to Yorkshire gilts, while Yorkshire gilts exhibit elevated progesterone (P4) and GnRH levels. We identified a total of 154 differentially expressed genes (DEGs), with 87 up-regulated and 67 down-regulated genes in the Wanyue black gilts ovaries compared to the Yorkshire gilts. GO enrichment analysis unveiled the participation of DEGs in processes such as "Reproduction", "Reproductive system development", and "Ovarian follicle development". Moreover, KEGG enrichment analysis revealed the involvement of DEGs in multiple signaling pathways associated with hormone biosynthesis and puberty, encompassing "Steroid hormone biosynthesis", "Estrogen signaling pathway", and "Prolactin signaling pathway". The subsequent bioinformatics analysis identified nine functional genes that potentially contribute to the disparity in ovaries between Wanyue black gilts and Yorkshire gilts. This study offers significant insights into the endocrine and genetic aspects of pubertal development in gilts.

Indexed as

giltovarypubertyreproductive hormonesRNA-seq

Identifiers

PMID38535849
PMCPMC10975710
OpenAlexW4392369618

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.