Evidence map›Paper›PMID 38535605›Full record

ArticlePathogens (Basel, Switzerland)2024

Genetic Diversity of Trypanosomes Infesting Cattle from Savannah District in North of Côte d'Ivoire Using Conserved Genomic Signatures: rRNA, ITS1 and gGAPDH.

Jean-Yves Ekra, Eliakunda Michael Mafie, Edouard K N'Goran, Dramane Kaba, Biégo Guillaume Gragnon, Jagan Srinivasan

Abstract read
In one paragraph

Article in Pathogens (Basel, Switzerland), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jean-Yves EkraDepartment of Veterinary Microbiology, Parasitology and Biotechnology, Sokoine University of Agriculture, Morogoro 67125, Tanzania.ORCID 0000-0002-6617-3751
Eliakunda Michael MafieDepartment of Veterinary Microbiology, Parasitology and Biotechnology, Sokoine University of Agriculture, Morogoro 67125, Tanzania.
Edouard K N'GoranUnité de Formation et de Recherche (UFR) des Sciences Biologiques, Département de Biochimie-Génétique, Université Peleforo Gon Coulibaly, Korhogo BP1328, Côte d'Ivoire.
Dramane KabaUnité de Recherche «Trypanosomoses», Institut Pierre Richet 01, Bouaké BP1500, Côte d'Ivoire.ORCID 0000-0001-7103-0440
Biégo Guillaume GragnonLaboratoire National d'Appui au Développement Agricole (LANADA), Korhogo BP1328, Côte d'Ivoire.
Jagan SrinivasanDepartment of Biology and Biotechnology, Worcester Polytechnic Institute, 100 Institute Rd., Worcester, MA 01609, USA.ORCID 0000-0001-5449-7938

Funding

PASET-RSIFRegional Scholarship and Innovation Fund (RSIF)The Partnership for Skills in Applied Sciences, Engineering and Technology (PASET)
6 · The paper itself

Abstract

The potential danger to livestock from African animal trypanosomiasis is well known. However, the trypanosome species circulating in cattle and their genetics are poorly understood. After different alignments according to three regions (ITS1, gGAPDH and rRNA gene) of the trypanosome genome, phylogenetic analyses were used to show the genetic diversity of the different species that were circulating in the cattle in three regions (Bagoue, Poro and Tchologo) of Côte d'Ivoire. These analyses were performed by alignment of ITS1; by alignment of partial 18S, ITS1, 5.8S, ITS2 and partial 28S rRNA genes; and by alignment of gGAPDH gene with sequences of Trypanosomes found in GenBank. Three species were identified (

Indexed as

Genetic VariationPhylogenyTrypanosomaAnimalsCattleCattle DiseasesCote d'IvoireDNA, ProtozoanDNA, Ribosomal SpacerGlyceraldehyde-3-Phosphate Dehydrogenase (Phosphorylating)RNA, RibosomalTrypanosomiasis, AfricanDNA, ProtozoanDNA, Ribosomal SpacerGlyceraldehyde-3-Phosphate Dehydrogenase (Phosphorylating)RNA, RibosomalcattleCôte d’Ivoirephylogenetictrypanosomes

Identifiers

PMID38535605
PMCPMC10974534

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.