Evidence map›Paper›PMID 38534787›Full record

ArticleCurrent issues in molecular biology2024

Unveiling the Molecular Mechanism of Trastuzumab Resistance in SKBR3 and BT474 Cell Lines for HER2 Positive Breast Cancer.

Anna Kokot, Sachin Gadakh, Indrajit Saha, Ewa Gajda, Michał Łaźniewski, Somnath Rakshit, Kaustav Sengupta, Ayatullah Faruk Mollah, Michał Denkiewicz, Katarzyna Górczak and 3 more

Open access · goldAbstract read
In one paragraph

Article in Current issues in molecular biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
4.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Erbin Inhibited AngiogenesisCurrent medicinal chemistry · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. The mechanism of ncRNA in trastuzumab resistance in HER2-positive tumors.Medical oncology (Northwood, London, England) · 2025
    Review
  10. Article
  11. Investigation ofBiology · 2024
    Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 4 countries.

Anna KokotDepartment of Clinical Molecular Biology, Medical University of Bialystok, 15-089 Bialystok, Poland.ORCID 0009-0001-2358-2918
Sachin GadakhCentre of New Technologies, University of Warsaw, 02-097 Warszawa, Poland.ORCID 0000-0002-7524-7898
Indrajit SahaCentre of New Technologies, University of Warsaw, 02-097 Warszawa, Poland.ORCID 0000-0001-9513-9707
Ewa GajdaDepartment of Clinical Molecular Biology, Medical University of Bialystok, 15-089 Bialystok, Poland.
Michał ŁaźniewskiCentre of New Technologies, University of Warsaw, 02-097 Warszawa, Poland.
Somnath RakshitCentre of New Technologies, University of Warsaw, 02-097 Warszawa, Poland.ORCID 0000-0002-2017-5997
Kaustav SenguptaCentre of New Technologies, University of Warsaw, 02-097 Warszawa, Poland.ORCID 0000-0003-0603-0916
Ayatullah Faruk MollahCentre of New Technologies, University of Warsaw, 02-097 Warszawa, Poland.ORCID 0000-0002-3445-7469
Michał DenkiewiczCentre of New Technologies, University of Warsaw, 02-097 Warszawa, Poland.ORCID 0000-0001-8890-9988
Katarzyna GórczakDepartment of Mathematics and Statistics, Hasselt University, 3500 Hasselt, Belgium.
Jürgen ClaesenDepartment of Epidemiology and Data Science, Amsterdam Universitair Medische Centra, VU University, 1081 HV Amsterdam, The Netherlands.ORCID 0000-0001-7615-5322
Tomasz BurzykowskiDepartment of Clinical Molecular Biology, Medical University of Bialystok, 15-089 Bialystok, Poland.ORCID 0000-0003-3378-975X
Dariusz PlewczynskiCentre of New Technologies, University of Warsaw, 02-097 Warszawa, Poland.ORCID 0000-0002-3840-7610
University of Warsaw · PLMedical University of Białystok · PLAmsterdam University Medical Centers · NLHasselt University · BENational Institute of Technical Teachers’ Training and Research · INWarsaw University of Technology · PL

Funding

Foundation for Polish Science POIR.04.04.00-00-3CA6/16-00Polish National Science Center 2015/17/N/NZ2/01932Polish National Science Centre 2019/35/O/ST6/02484 and 2020/37/B/NZ2/03757
6 · The paper itself

Abstract

HER2-positive breast cancer is one of the most prevalent forms of cancer among women worldwide. Generally, the molecular characteristics of this breast cancer include activation of human epidermal growth factor receptor-2 (HER2) and hormone receptor activation. HER2-positive is associated with a higher death rate, which led to the development of a monoclonal antibody called trastuzumab, specifically targeting HER2. The success rate of HER2-positive breast cancer treatment has been increased; however, drug resistance remains a challenge. This fact motivated us to explore the underlying molecular mechanisms of trastuzumab resistance. For this purpose, a two-fold approach was taken by considering well-known breast cancer cell lines SKBR3 and BT474. In the first fold, trastuzumab treatment doses were optimized separately for both cell lines. This was done based on the proliferation rate of cells in response to a wide variety of medication dosages. Thereafter, each cell line was cultivated with a steady dosage of herceptin for several months. During this period, six time points were selected for further in vitro analysis, ranging from the untreated cell line at the beginning to a fully resistant cell line at the end of the experiment. In the second fold, nucleic acids were extracted for further high throughput-based microarray experiments of gene and microRNA expression. Such expression data were further analyzed in order to infer the molecular mechanisms involved in the underlying development of trastuzumab resistance. In the list of differentially expressed genes and miRNAs, multiple genes (e.g.,

Indexed as

breast cancerdrug resistanceHER2microarraymicroRNA

Identifiers

PMID38534787
PMCPMC10969458
OpenAlexW4393038852

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.