Evidence map›Paper›PMID 38534739›Full record

ArticleCurrent issues in molecular biology2024

Ferroptosis-Related lncRNA to Predict the Clinical Outcomes and Molecular Characteristics of Kidney Renal Papillary Cell Carcinoma.

Yubo Gong, Chenchen Zhang, Hao Li, Xiaojie Yu, Yuejia Li, Zhiguo Liu, Ruyi He

Abstract read
In one paragraph

Article in Current issues in molecular biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yubo GongSchool of Life Science and Technology, Wuhan Polytechnic University, Wuhan 430023, China.ORCID 0009-0005-9235-5339
Chenchen ZhangSchool of Life Science and Technology, Wuhan Polytechnic University, Wuhan 430023, China.
Hao LiSchool of Life Science and Technology, Wuhan Polytechnic University, Wuhan 430023, China.
Xiaojie YuSchool of Life Science and Technology, Wuhan Polytechnic University, Wuhan 430023, China.
Yuejia LiSchool of Life Science and Technology, Wuhan Polytechnic University, Wuhan 430023, China.
Zhiguo LiuSchool of Life Science and Technology, Wuhan Polytechnic University, Wuhan 430023, China.ORCID 0000-0001-7325-6478
Ruyi HeSchool of Life Science and Technology, Wuhan Polytechnic University, Wuhan 430023, China.

Funding

The central government guides local science and technology development projects No. 2019ZYYD 032The major scientific and technological research project of Tianjin No. TSBICIP-KJGG-010The Open Funding Project of the State Key Laboratory of Biocatalysis and Enzyme Engineering No. SKLBEE2021018Wuhan Polytechnic University WHPU2023Y20
6 · The paper itself

Abstract

Kidney renal papillary cell carcinoma (KIRP) is a highly heterogeneous type of kidney cancer, resulting in limited effective prognostic targets for KIRP patients. Long non-coding RNAs (lncRNAs) have emerged as crucial regulators in the regulation of ferroptosis and iron metabolism, making them potential targets for the treatment and prognosis of KIRP. In this study, we constructed a ferroptosis-related lncRNA risk score model (FRM) based on the TCGA-KIRP dataset, which represents a novel subtype of KIRP not previously reported. The model demonstrated promising diagnostic accuracy and holds potential for clinical translation. We observed significant differences in metabolic activities, immune microenvironment, mutation landscape, ferroptosis sensitivity, and drug sensitivity between different risk groups. The high-risk groups exhibit significantly higher fractions of cancer-associated fibroblasts (CAFs), hematopoietic stem cells (HSC), and pericytes. Drugs (IC50) analysis provided a range of medication options based on different FRM typing. Additionally, we employed single-cell transcriptomics to further analyze the impact of immune invasion on the occurrence and development of KIRP. Overall, we have developed an accurate prognostic model based on the expression patterns of ferroptosis-related lncRNAs for KIRP. This model has the potential to contribute to the evaluation of patient prognosis, molecular characteristics, and treatment modalities, and can be further translated into clinical applications.

Indexed as

clinical outcomeferroptosisKIRPlncRNArisk model

Identifiers

PMID38534739
PMCPMC10969180

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.