Evidence map›Paper›PMID 38534235›Full record

ArticleBiosensors2024

Low-Cost Arduino Reverse Transcriptase Loop-Mediated Isothermal Amplification (RT-LAMP) for Sensitive Nucleic Acid Detection.

Bruno Dias Camargo, Mateus Cassaboni Stracke, Heloisa Bruna Soligo Sanchuki, Viviane Klassen de Oliveira, Hellen Cristina Ancelmo, Dayanne Mozaner Bordin, Fabricio Klerynton Marchini, Emilson Ribeiro Viana, Lucas Blanes

Abstract read
In one paragraph

Article in Biosensors, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Article
  3. Development of RT-LAMP assay for variants of HCV in Pakistan.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2025
    Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Bruno Dias CamargoLaboratory for Applied Science and Technology in Health, Carlos Chagas Institute, Oswaldo Cruz Foundation (Fiocruz), Professor Algacyr Munhoz Mader 3775 St., Curitiba 81350-010, Brazil.ORCID 0000-0002-2330-9911
Mateus Cassaboni StrackeLaboratory for Applied Science and Technology in Health, Carlos Chagas Institute, Oswaldo Cruz Foundation (Fiocruz), Professor Algacyr Munhoz Mader 3775 St., Curitiba 81350-010, Brazil.ORCID 0000-0002-4692-2022
Heloisa Bruna Soligo SanchukiLaboratory for Applied Science and Technology in Health, Carlos Chagas Institute, Oswaldo Cruz Foundation (Fiocruz), Professor Algacyr Munhoz Mader 3775 St., Curitiba 81350-010, Brazil.ORCID 0000-0002-8010-5077
Viviane Klassen de OliveiraParaná Institute of Molecular Biology, Professor Algacyr Munhoz Mader 3775 St., Curitiba 81350-010, Brazil.ORCID 0009-0000-5436-0691
Hellen Cristina AncelmoLaboratory for Applied Science and Technology in Health, Carlos Chagas Institute, Oswaldo Cruz Foundation (Fiocruz), Professor Algacyr Munhoz Mader 3775 St., Curitiba 81350-010, Brazil.ORCID 0000-0001-9982-8315
Dayanne Mozaner BordinSchool of Mathematical and Physical Sciences, Faculty of Science, University of Technology Sydney, Ultimo, NSW 2007, Australia.ORCID 0009-0007-6936-1508
Fabricio Klerynton MarchiniLaboratory for Applied Science and Technology in Health, Carlos Chagas Institute, Oswaldo Cruz Foundation (Fiocruz), Professor Algacyr Munhoz Mader 3775 St., Curitiba 81350-010, Brazil.
Emilson Ribeiro VianaAcademic Department of Physics (DAFIS), Federal University of Technology-Paraná (UTFPR), Sete de Setembro 3165 Av., Curitiba 80230-901, Brazil.
Lucas BlanesLaboratory for Applied Science and Technology in Health, Carlos Chagas Institute, Oswaldo Cruz Foundation (Fiocruz), Professor Algacyr Munhoz Mader 3775 St., Curitiba 81350-010, Brazil.ORCID 0000-0003-2929-6696

Funding

Brazilian National Council for Scientific and Technological Development (CNPq) 442329/2019-9Fiotec (Brazilian Foundation for the Scientific and Technological Development in Health Grants) VPPIS-004-FIO-18-40Fiotec (Brazilian Foundation for the Scientific and Technological Development in Health Grants) VPPIS-005-FIO-20-2-19
6 · The paper itself

Abstract

This work presents a low-cost transcription loop-mediated isothermal amplification (RT-LAMP) instrument for nucleic acid detection, employing an Arduino Nano microcontroller. The cooling system includes customized printed circuit boards (PCBs) that serve as electrical resistors and incorporate fans. An aluminum block is designed to accommodate eight vials. The system also includes two PCB heaters-one for sample heating and the other for vial lid heating to prevent condensation. The color detection system comprises a TCS3200 color 8-sensor array coupled to one side of the aluminum heater body and a white 8-LED array coupled to the other side, controlled by two Multiplexer/Demultiplexer devices. LED light passes through the sample, reaching the color sensor and conveying color information crucial for detection. The top board is maintained at 110 ± 2 °C, while the bottom board is held at 65 ± 0.5 °C throughout the RT-LAMP assay. Validation tests successfully demonstrated the efficacy of the colorimetric RT-LAMP reactions using SARS-CoV-2 RNA amplification as a sample viability test, achieving 100% sensitivity and 97.3% specificity with 66 clinical samples. Our instrument offers a cost-effective (USD 100) solution with automated result interpretation and superior sensitivity compared to visual inspection. While the prototype was tested with SARS-CoV-2 RNA samples, its versatility extends to detecting other pathogens using alternative primers, showcasing its potential for broader applications in biosensing.

Indexed as

RNA-Directed DNA PolymeraseRNA, ViralAluminumDNA-Directed RNA PolymerasesMolecular Diagnostic TechniquesNucleic Acid Amplification TechniquesSensitivity and SpecificityAluminumDNA-Directed RNA PolymerasesRNA-Directed DNA PolymeraseRNA, ViralArduinoisothermal amplificationnucleic acid detectionreverse transcriptase loop-mediated isothermal amplificationRT-LAMP

Identifiers

PMID38534235
PMCPMC10968452

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.