Evidence map›Paper›PMID 38533527›Full record

ArticleProtein science : a publication of the Protein Society2024

Conserved proline residues prevent dimerization and aggregation in the β-lactamase BlaC.

A Chikunova, M P Manley, C N Heijjer, C S Drenth, A J Cramer-Blok, M Ud Din Ahmad, A Perrakis, M Ubbink

Abstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Conserved proline residues prevent dimerization and aggregation in the β-lactamase BlaC.Protein science : a publication of the Protein Society · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

A ChikunovaLeiden Institute of Chemistry, Leiden University, Leiden, The Netherlands.
M P ManleyLeiden Institute of Chemistry, Leiden University, Leiden, The Netherlands.
C N HeijjerLeiden Institute of Chemistry, Leiden University, Leiden, The Netherlands.
C S DrenthLeiden Institute of Chemistry, Leiden University, Leiden, The Netherlands.
A J Cramer-BlokLeiden Institute of Chemistry, Leiden University, Leiden, The Netherlands.
M Ud Din AhmadDivision of Biochemistry, The Netherlands Cancer Institute, Amsterdam, The Netherlands.
A PerrakisDivision of Biochemistry, The Netherlands Cancer Institute, Amsterdam, The Netherlands.
M UbbinkLeiden Institute of Chemistry, Leiden University, Leiden, The Netherlands.ORCID 0000-0002-2615-6914

Funding

Horizon 2020 Framework ProgrammeNederlandse Organisatie voor Wetenschappelijk Onderzoek
6 · The paper itself

Abstract

Evolution leads to conservation of amino acid residues in protein families. Conserved proline residues are usually considered to ensure the correct folding and to stabilize the three-dimensional structure. Surprisingly, proline residues that are highly conserved in class A β-lactamases were found to tolerate various substitutions without large losses in enzyme activity. We investigated the roles of three conserved prolines at positions 107, 226, and 258 in the β-lactamase BlaC from Mycobacterium tuberculosis and found that mutations can lead to dimerization of the enzyme and an overall less stable protein that is prone to aggregate over time. For the variant Pro107Thr, the crystal structure shows dimer formation resembling domain swapping. It is concluded that the proline substitutions loosen the structure, enhancing multimerization. Even though the enzyme does not lose its properties without the conserved proline residues, the prolines ensure the long-term structural integrity of the enzyme.

Indexed as

Mycobacterium tuberculosisProlinebeta-LactamasesDimerizationbeta-LactamasesProlinebeta‐lactamaseconserved residuesdimerizationprolines

Identifiers

PMID38533527
PMCPMC10966351

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.