Evidence map›Paper›PMID 38533130›Full record

ArticleFrontiers in microbiology2023

Development and validation of a random forest algorithm for source attribution of animal and human

Jaromir Guzinski, Yue Tang, Marie Anne Chattaway, Timothy J Dallman, Liljana Petrovska

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Impact of Farm Management Practices onFoods (Basel, Switzerland) · 2026
    Review
  2. Predicting clinical outcome ofMicrobial genomics · 2025
    Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jaromir GuzinskiAnimal and Plant Health Agency, Bacteriology Department, Addlestone, United Kingdom.
Yue TangAnimal and Plant Health Agency, Bacteriology Department, Addlestone, United Kingdom.
Marie Anne ChattawayGastrointestinal Bacteria Reference Unit, UK Health Security Agency, London, United Kingdom.
Timothy J DallmanGastrointestinal Bacteria Reference Unit, UK Health Security Agency, London, United Kingdom.
Liljana PetrovskaAnimal and Plant Health Agency, Bacteriology Department, Addlestone, United Kingdom.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Source attribution has traditionally involved combining epidemiological data with different pathogen characterisation methods, including 7-gene multi locus sequence typing (MLST) or serotyping, however, these approaches have limited resolution. In contrast, whole genome sequencing data provide an overview of the whole genome that can be used by attribution algorithms. Here, we applied a random forest (RF) algorithm to predict the primary sources of human clinical

Indexed as

bacterial genomicscore-genome multi locus sequence typingmachine learningrandom forestSalmonella Typhimuriumsource attribution

Identifiers

PMID38533130
PMCPMC10963456

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.