Evidence map›Paper›PMID 38532927›Full record

ArticleJournal of biomedical optics2024

Structurally constrained and pathology-aware convolutional transformer generative adversarial network for virtual histology staining of human coronary optical coherence tomography images.

Xueshen Li, Hongshan Liu, Xiaoyu Song, Charles C Marboe, Brigitta C Brott, Silvio H Litovsky, Yu Gan

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Article in Journal of biomedical optics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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2citing papers in PubMed
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3 · Its place in the literature

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2 citing papers in PubMed.

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5 · Who and what money

Authors and funding

7 authors.

Xueshen LiStevens Institute of Technology, Department of Biomedical Engineering, Hoboken, New Jersey, United States.
Hongshan LiuStevens Institute of Technology, Department of Biomedical Engineering, Hoboken, New Jersey, United States.
Xiaoyu SongIcahn School of Medicine at Mount Sinai, New York, New York, United States.
Charles C MarboeColumbia University Medical Center, New York, New York, United States.
Brigitta C BrottThe University of Alabama at Birmingham, School of Medicine, Birmingham, Alabama, United States.
Silvio H LitovskyThe University of Alabama at Birmingham, School of Medicine, Birmingham, Alabama, United States.
Yu GanStevens Institute of Technology, Department of Biomedical Engineering, Hoboken, New Jersey, United States.ORCID 0000-0003-3409-3412

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Significance: There is a significant need for the generation of virtual histological information from coronary optical coherence tomography (OCT) images to better guide the treatment of coronary artery disease (CAD). However, existing methods either require a large pixel-wise paired training dataset or have limited capability to map pathological regions. Aim: The aim of this work is to generate virtual histological information from coronary OCT images, without a pixel-wise paired training dataset while capable of providing pathological patterns. Approach: We design a structurally constrained, pathology-aware, transformer generative adversarial network, namely structurally constrained pathology-aware convolutional transformer generative adversarial network (SCPAT-GAN), to generate virtual stained H&E histology from OCT images. We quantitatively evaluate the quality of virtual stained histology images by measuring the Fréchet inception distance (FID) and perceptual hash value (PHV). Moreover, we invite experienced pathologists to evaluate the virtual stained images. Furthermore, we visually inspect the virtual stained image generated by SCPAT-GAN. Also, we perform an ablation study to validate the design of the proposed SCPAT-GAN. Finally, we demonstrate 3D virtual stained histology images. Results: Compared to previous research, the proposed SCPAT-GAN achieves better FID and PHV scores. The visual inspection suggests that the virtual histology images generated by SCPAT-GAN resemble both normal and pathological features without artifacts. As confirmed by the pathologists, the virtual stained images have good quality compared to real histology images. The ablation study confirms the effectiveness of the combination of proposed pathological awareness and structural constraining modules. Conclusions: The proposed SCPAT-GAN is the first to demonstrate the feasibility of generating both normal and pathological patterns without pixel-wisely supervised training. We expect the SCPAT-GAN to assist in the clinical evaluation of treating the CAD by providing 2D and 3D histopathological visualizations.

Indexed as

Coronary Artery DiseaseTomography, Optical CoherenceArtifactsHeartHumansImage Processing, Computer-AssistedStaining and Labelinggenerative adversarial networkhistopathologyoptical coherence tomographytransformervirtual histology

Identifiers

PMID38532927
PMCPMC10964178

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