Evidence map›Paper›PMID 38532498›Full record

ArticleVeterinary research2024

The spontaneously produced lysogenic prophage phi456 promotes bacterial resistance to adverse environments and enhances the colonization ability of avian pathogenic Escherichia coli strain DE456.

Dezhi Li, Wei Liang, Zhiqiang Huang, Wenwen Ma, Qing Liu

Open access · goldAbstract read
In one paragraph

Article in Veterinary research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
3.7field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Prophage: agent provocateur?Archives of microbiology · 2026
    Review
  2. Article
  3. Article
  4. SoybeanViruses · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Dezhi Li *School of Health Science and Engineering, University of Shanghai for Science and Technology, Shanghai, China.
Wei Liang *The Fourth Affiliated Hospital of Guangxi Medical University, Liuzhou, China.
Zhiqiang HuangSchool of Health Science and Engineering, University of Shanghai for Science and Technology, Shanghai, China.
Wenwen MaSchool of Health Science and Engineering, University of Shanghai for Science and Technology, Shanghai, China.
Qing LiuSchool of Health Science and Engineering, University of Shanghai for Science and Technology, Shanghai, China. liuq@usst.edu.cn.ORCID http://orcid.org/0000-0002-5152-2736
University of Shanghai for Science and Technology · CNFourth Affiliated Hospital of Guangxi Medical University · CNNanjing Agricultural University · CN

Funding

The National Key Research and Development Program of China 2023YFF1105001
6 · The paper itself

Abstract

In the last decade, prophages that possess the ability of lysogenic transformation have become increasingly significant. Their transfer and subsequent activity in the host have a significant impact on the evolution of bacteria. Here, we investigate the role of prophage phi456 with high spontaneous induction in the bacterial genome of Avian pathogenic Escherichia coli (APEC) DE456. The phage particles, phi456, that were released from DE456 were isolated, purified, and sequenced. Additionally, phage particles were no longer observed either during normal growth or induced by nalidixic acid in DE456Δphi456. This indicated that the released phage particles from DE456 were only phi456. We demonstrated that phi456 contributed to biofilm formation through spontaneous induction of the accompanying increase in the eDNA content. The survival ability of DE456Δphi456 was decreased in avian macrophage HD11 under oxidative stress and acidic conditions. This is likely due to a decrease in the transcription levels of three crucial genes-rpoS, katE, and oxyR-which are needed to help the bacteria adapt to and survive in adverse environments. It has been observed through animal experiments that the presence of phi456 in the DE456 genome enhances colonization ability in vivo. Additionally, the number of type I fimbriae in DE456Δphi456 was observed to be reduced under transmission electron microscopy when compared to the wild-type strain. The qRT-PCR results indicated that the expression levels of the subunit of I fimbriae (fimA) and its apical adhesin (fimH) were significantly lower in DE456Δphi456. Therefore, it can be concluded that phi456 plays a crucial role in helping bacterial hosts survive in unfavorable conditions and enhancing the colonization ability in DE456.

Indexed as

BacteriophagesEscherichia coli InfectionsAdhesins, BacterialAnimalsChickensEscherichia coliProphagesAdhesins, Bacterialavian pathogenic E. colibiofilmcolonizationenvironmental stressProphage

Identifiers

PMID38532498
PMCPMC10967188
OpenAlexW4393190611

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.