Evidence map›Paper›PMID 38532465›Full record

ArticleJournal of translational medicine2024

Bulk RNA sequencing for analysis of post COVID-19 condition in adolescents and young adults.

Silke Lauren Sommen, Zhi Zhao, Sunniva Segtnan, Tonje Stiansen-Sonerud, Joel Selvakumar, Lise Beier Havdal, Johannes Gjerstad, Vegard Bruun Bratholm Wyller, Lise Lund Berven

Open access · goldAbstract read
In one paragraph

Article in Journal of translational medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Silke Lauren SommenDepartment of Pediatrics, Akershus University Hospital, Lørenskog, Norway.
Zhi ZhaoOslo Centre for Biostatistics and Epidemiology (OCBE), Institute of Basic Medical Sciences, Faculty of Medicine, University of Oslo, Oslo, Norway.
Sunniva SegtnanUniversity of Oslo, Oslo, Norway.
Tonje Stiansen-SonerudDepartment of Pediatrics, Akershus University Hospital, Lørenskog, Norway.
Joel SelvakumarDepartment of Pediatrics, Akershus University Hospital, Lørenskog, Norway.
Lise Beier HavdalDepartment of Pediatrics, Akershus University Hospital, Lørenskog, Norway.
Johannes GjerstadDepartment of Behavioural Sciences, Faculty of Health Sciences, Oslo Metropolitan University, Oslo, Norway.
Vegard Bruun Bratholm WyllerDepartment of Pediatrics, Akershus University Hospital, Lørenskog, Norway.
Lise Lund BervenDepartment of Pediatrics, Akershus University Hospital, Lørenskog, Norway. lise.lund-berven@medisin.uio.no.
University of Oslo · NOAkershus University Hospital · NOOsloMet – Oslo Metropolitan University · NO

Funding

Norges Forskningsråd 302079
6 · The paper itself

Abstract

backgroundPost COVID-19 condition (PCC) is a complication of SARS-COV-2 infection and can lead to long-term disability.

methodsThe present study was designed to analyse the gene expression patterns of PCC through bulk RNA sequencing of whole blood and to explore the potential molecular mechanisms of PCC. Whole blood was collected from 80 participants enrolled in a prospective cohort study following SARS-CoV-2 infected and non-infected individuals for 6 months after recruitment and was used for bulk RNA sequencing. Identification of differentially expressed genes (DEG), pathway enrichment and immune cell deconvolution was performed to explore potential biological pathways involved in PCC.

resultsWe have found 13 differentially expressed genes associated with PCC. Enriched pathways were related to interferon-signalling and anti-viral immune processes.

conclusionThe PCC transcriptome is characterized by a modest overexpression of interferon-stimulated genes, pointing to a subtle ongoing inflammatory response.

Indexed as

COVID-19AdolescentChronic DiseaseHumansInterferonsPost-Acute COVID-19 SyndromeProspective StudiesSARS-CoV-2Sequence Analysis, RNAYoung AdultInterferonsAdolescentChildImmunologyLong COVIDPost COVID-19 conditionRNA sequencingTranscriptomics

Identifiers

PMID38532465
PMCPMC10964710
OpenAlexW4393191731

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.