Evidence map›Paper›PMID 38532403›Full record

ArticleBMC veterinary research2024

The ARIMA model approach for the biofilm-forming capacity prediction of Listeria monocytogenes recovered from carcasses.

Adalet Dishan, Mukaddes Barel, Serhat Hizlisoy, Recep Sinan Arslan, Harun Hizlisoy, Dursun Alp Gundog, Serhat Al, Zafer Gonulalan

Open access · goldAbstract read
In one paragraph

Article in BMC veterinary research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
1.2field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 3 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Adalet DishanFaculty of Veterinary Medicine, Department of Food Hygiene and Technology, Yozgat Bozok University, Yozgat, Turkey. adalet.dishan@bozok.edu.tr.
Mukaddes BarelFaculty of Veterinary Medicine, Department of Veterinary Public Health, Erciyes University, Kayseri, Turkey.
Serhat HizlisoyFaculty of Engineering and Architecture, Department of Computer Engineering, Kayseri University, Kayseri, Turkey.
Recep Sinan ArslanFaculty of Engineering and Architecture, Department of Computer Engineering, Kayseri University, Kayseri, Turkey.
Harun HizlisoyFaculty of Veterinary Medicine, Department of Veterinary Public Health, Erciyes University, Kayseri, Turkey.
Dursun Alp GundogFaculty of Veterinary Medicine, Department of Veterinary Public Health, Erciyes University, Kayseri, Turkey.
Serhat AlFaculty of Veterinary Medicine, Department of Veterinary Public Health, Erciyes University, Kayseri, Turkey.
Zafer GonulalanFaculty of Veterinary Medicine, Department of Veterinary Public Health, Erciyes University, Kayseri, Turkey.
Erciyes University · TRKayseri Eğitim ve Araştırma Hastanesi · TRBozok Universitesi · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The present study aimed to predict the biofilm-formation ability of L. monocytogenes isolates obtained from cattle carcasses via the ARIMA model at different temperature parameters. The identification of L. monocytogenes obtained from carcass samples collected from slaughterhouses was determined by PCR. The biofilm-forming abilities of isolates were phenotypically determined by calculating the OD value and categorizing the ability via the microplate test. The presence of some virulence genes related to biofilm was revealed by QPCR to support the biofilm profile genotypically. Biofilm-formation of the isolates was evaluated at different temperature parameters (37 °C, 22 °C, 4 °C and - 20 °C). Estimated OD values were obtained with the ARIMA model by dividing them into eight different estimation groups. The prediction performance was determined by performance measurement metrics (ME, MAE, MSE, RMSE, MPE and MAPE). One week of incubation showed all isolates strongly formed biofilm at all controlled temperatures except - 20 °C. In terms of the metrics examined, the 3 days to 7 days forecast group has a reasonable prediction accuracy based on OD values occurring at 37 °C, 22 °C, and 4 °C. It was concluded that measurements at 22 °C had lower prediction accuracy compared to predictions from other temperatures. Overall, the best OD prediction accuracy belonged to the data obtained from biofilm formation at -20 °C. For all temperatures studied, especially after the 3 days to 7 days forecast group, there was a significant decrease in the error metrics and the forecast accuracy increased. When evaluating the best prediction group, the lowest RMSE at 37 °C (0.055), 22 °C (0.027) and 4 °C (0.024) belonged to the 15 days to 21 days group. For the OD predictions obtained at -20 °C, the 15 days to 21 days prediction group had also good performance (0.011) and the lowest RMSE belongs to the 7 days to 15 days group (0.007). In conclusion, this study will guide in using indicator parameters to evaluate biofilm forming ability to predict optimum temperature-time. The ARIMA models integrated with this study can be useful tools for industrial application and risk assessment studies using different parameters such as pH, NaCl concentration, and especially temperature applied during food processing and storage on the biofilm-formation ability of L. monocytogenes.

Indexed as

Listeria monocytogenesAnimalsBiofilmsCattleFood HandlingModels, StatisticalTemperatureARIMABiofilmL. monocytogenesPredictionVirulence

Identifiers

PMID38532403
PMCPMC10967039
OpenAlexW4393230182

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.