Evidence map›Paper›PMID 38531918›Full record

ArticleScientific reports2024

The complete mitochondrial genome of Leucoptera coffeella (Lepidoptera: Lyonetiidae) and phylogenetic relationships within the Yponomeutoidea superfamily.

Mateus Pereira Dos Santos, Ana Paula Zotta Mota, Roberto Coiti Togawa, Natalia Florencio Martins, Eliza Fabricio de Melo Bellard do Nascimento, Vivian Santos Lucena, Maria Aparecida Castellani, Erika Valéria Saliba Albuquerque, Frédérique Hilliou

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Species-SpecificInsects · 2026
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Mateus Pereira Dos Santos *Department of Crop Science and Animal Science, State University of Southwestern Bahia, Vitória da Conquista, 45083-300, Brazil.
Ana Paula Zotta Mota *INRAE, Institut Sophia Agrobiotech, Université Côte D'Azur, CNRS, Sophia Antipolis, France.
Roberto Coiti TogawaEmbrapa Genetic Resources & Biotechnology, Brasília, 70770-917, Brazil.
Natalia Florencio MartinsEMBRAPA Agroindústrial Tropical, Fortaleza, CE, 60511-110, Brazil.
Eliza Fabricio de Melo Bellard do NascimentoEmbrapa Genetic Resources & Biotechnology, Brasília, 70770-917, Brazil.
Vivian Santos LucenaEmbrapa Genetic Resources & Biotechnology, Brasília, 70770-917, Brazil.
Maria Aparecida CastellaniDepartment of Crop Science and Animal Science, State University of Southwestern Bahia, Vitória da Conquista, 45083-300, Brazil.
Erika Valéria Saliba AlbuquerqueEmbrapa Genetic Resources & Biotechnology, Brasília, 70770-917, Brazil.
Frédérique HilliouINRAE, Institut Sophia Agrobiotech, Université Côte D'Azur, CNRS, Sophia Antipolis, France. frederique.hilliou@inrae.fr.
Brazilian Agricultural Research Corporation · BRCentre National de la Recherche Scientifique · FRInstitut Sophia Agrobiotech · FRSouthwest Bahia State University · BR

Funding

Conselho Nacional de Desenvolvimento Científico e Tecnológico 402834/2022-4
6 · The paper itself

Abstract

The coffee leaf miner (Leucoptera coffeella) is one of the major pests of coffee crops in the neotropical regions, and causes major economic losses. Few molecular data are available to identify this pest and advances in the knowledge of the genome of L. coffeella will contribute to improving pest identification and also clarify taxonomy of this microlepidoptera. L. coffeella DNA was extracted and sequenced using PacBio HiFi technology. Here we report the complete L. coffeella circular mitochondrial genome (16,407 bp) assembled using Aladin software. We found a total of 37 genes, including 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), 2 ribosomal RNA genes (rRNAs) and an A + T rich-region and a D-loop. The L. coffeella mitochondrial gene organization is highly conserved with similarities to lepidopteran mitochondrial gene rearrangements (trnM-trnI-trnQ). We concatenated the 13 PCG to construct a phylogenetic tree and inferred the relationship between L. coffeella and other lepidopteran species. L. coffeella is found in the Lyonetiidae clade together with L. malifoliella and Lyonetia clerkella, both leaf miners. Interestingly, this clade is assigned in the Yponomeutoidea superfamily together with Gracillariidae, and both superfamilies displayed species with leaf-mining feeding habits.

Indexed as

Genome, MitochondrialLepidopteraMothsAnimalsBase SequenceGenes, MitochondrialPhylogenyRNA, TransferRNA, Transfer

Identifiers

PMID38531918
PMCPMC10965899
OpenAlexW4393193914

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.