Evidence map›Paper›PMID 38530505›Full record

ArticlePhotosynthesis research2024

In vitro demetalation of central magnesium in various chlorophyll derivatives using Mg-dechelatase homolog from the chloroflexi Anaerolineae.

Soma Sato, Mitsuaki Hirose, Ryouichi Tanaka, Hisashi Ito, Hitoshi Tamiaki

Open access · hybridAbstract read
In one paragraph

Article in Photosynthesis research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Soma SatoGraduate School of Life Sciences, Ritsumeikan University, Kusatsu, Shiga, 525-8577, Japan.
Mitsuaki HiroseGraduate School of Life Sciences, Ritsumeikan University, Kusatsu, Shiga, 525-8577, Japan.
Ryouichi TanakaInstitute of Low Temperature Science, Hokkaido University, N19 W8, Sapporo, 060-0819, Japan.
Hisashi ItoInstitute of Low Temperature Science, Hokkaido University, N19 W8, Sapporo, 060-0819, Japan.
Hitoshi TamiakiGraduate School of Life Sciences, Ritsumeikan University, Kusatsu, Shiga, 525-8577, Japan. tamiaki@fc.ritsumei.ac.jp.
Hokkaido University · JPRitsumeikan University · JPSeikei University · JP

Funding

Japan Society for the Promotion of Science 21J22995Japan Society for the Promotion of Science 22H02203Japan Society for the Promotion of Science 23H04960Japan Society for the Promotion of Science 23K0569103
6 · The paper itself

Abstract

In the metabolic pathway of chlorophylls (Chls), an enzyme called STAY-GREEN or SGR catalyzes the removal of the central magnesium ion of Chls and their derivatives to their corresponding free bases, including pheophytins. The substrate specificity of SGR has been investigated through in vitro reactions using Chl-related molecules. However, information about the biochemical properties and reaction mechanisms of SGR and its substrate specificity remains elusive. In this study, we synthesized various Chl derivatives and investigated their in vitro dechelations using an SGR enzyme. Chl-a derivatives with the C3-vinyl group on the A-ring, which is commonly found as a substituent in natural substrates, and their analogs with ethyl, hydroxymethyl, formyl, and styryl groups at the C3-position were prepared as substrates. In vitro dechelatase reactions of these substrates were performed using an SGR enzyme derived from an Anaerolineae bacterium, allowing us to investigate their specificity. Reactivity was reduced for substrates with an electron-withdrawing formyl or sterically demanding styryl group at the C3-position. Furthermore, the Chl derivative with the C8-styryl group on the B-ring was less reactive for SGR dechelation than the C3-styryl substrate. These results indicate that the SGR enzyme recognizes substituents on the B-ring of substrates more than those on the A-ring.

Indexed as

ChloroflexiChlorophyllEnzymesMagnesiumPheophytinsChlorophyllEnzymesMagnesiummagnesium dechelatasePheophytinsChlorophyll degradationStay-GreenSubstitution effectSubstrate specificity

Identifiers

PMID38530505
PMCPMC11006732
OpenAlexW4393196340

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.