Evidence map›Paper›PMID 38530250›Full record

ArticleBioscience reports2024

Enzymatic activity of cGAS in the presence of three types of DNAs: limited cGAS stimulation by single-stranded HIV-1 SL2 DNA.

Mineyuki Mizuguchi, Niko Kyan, Suzuka Nishimata, Yuko Nabeshima, Takayuki Obita

Open access · goldAbstract read
In one paragraph

Article in Bioscience reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 95% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 0 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Mineyuki MizuguchiFaculty of Pharmaceutical Sciences, University of Toyama, Toyama 930-0194, Japan.ORCID 0000-0003-0450-0339
Niko KyanFaculty of Pharmaceutical Sciences, University of Toyama, Toyama 930-0194, Japan.
Suzuka NishimataFaculty of Pharmaceutical Sciences, University of Toyama, Toyama 930-0194, Japan.
Yuko NabeshimaFaculty of Pharmaceutical Sciences, University of Toyama, Toyama 930-0194, Japan.
Takayuki ObitaFaculty of Pharmaceutical Sciences, University of Toyama, Toyama 930-0194, Japan.
University of Toyama · JP

Funding

Japan Society for the Promotion of Science London (JSPS) 19K07026Japan Society for the Promotion of Science London (JSPS) 22K06546
6 · The paper itself

Abstract

Cyclic GMP-AMP (cGAMP) synthase (cGAS) is activated by binding to DNA. Activated cGAS produces 2'3'-cGAMP, which subsequently binds to the adaptor protein STING (stimulator of interferon genes). This interaction triggers the cGAS/STING signaling pathway, leading to the production of type I interferons. Three types of DNA, namely double-stranded DNA longer than 40 base pairs, a 70-nucleotide single-stranded HIV-1 DNA known as SL2, and Y-form DNA with unpaired guanosine trimers (G3 Y-form DNA), induce interferon production by activating cGAS/STING signaling. However, the extent of cGAS activation by each specific DNA type remains unclear. The comparison of cGAS stimulation by various DNAs is crucial for understanding the mechanisms underlying cGAS-mediated type I interferon production in the innate immune response. Here, we revealed that cGAS produces 2'3'-cGAMP at a significantly lower rate in the presence of single-stranded SL2 DNA than in the presence of double-stranded DNA or G3 Y-form DNA. Furthermore, the guanine-to-cytosine mutations and the deletion of unpaired guanosine trimers significantly reduced the 2'3'-cGAMP production rate and the binding of cGAS to Y-form DNA. These studies will provide new insights into the cGAS-mediated DNA-sensing in immune response.

Indexed as

HIV-1Interferon Type IDNADNA, Single-StrandedGuanosineImmunity, InnateNucleotidyltransferasesDNADNA, Single-StrandedGuanosineInterferon Type INucleotidyltransferasescGAMPcGASenzymatic activityG3 Y-from DNAHIV-1 SL2 DNA

Identifiers

PMID38530250
PMCPMC10994814
OpenAlexW4393190919

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.