Evidence map›Paper›PMID 38530135›Full record

ArticleMedical physics2024

Lung CT harmonization of paired reconstruction kernel images using generative adversarial networks.

Aravind R Krishnan, Kaiwen Xu, Thomas Z Li, Lucas W Remedios, Kim L Sandler, Fabien Maldonado, Bennett A Landman

Open access · hybridAbstract read
In one paragraph

Article in Medical physics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 6 citations in OpenAlex.

  1. Impact of reconstruction kernel variability on segmentation consistency in low-dose thoracic CT.Proceedings of SPIE--the International Society for Optical Engineering · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Aravind R KrishnanDepartment of Electrical and Computer Engineering, Vanderbilt University, Nashville, Tennessee, USA.
Kaiwen XuDepartment of Computer Science, Vanderbilt University, Nashville, Tennessee, USA.
Thomas Z LiDepartment of Biomedical Engineering, Vanderbilt University, Nashville, Tennessee, USA.
Lucas W RemediosDepartment of Computer Science, Vanderbilt University, Nashville, Tennessee, USA.
Kim L SandlerDepartment of Radiology, Vanderbilt University Medical Center, Nashville, Tennessee, USA.
Fabien MaldonadoDepartment of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee, USA.
Bennett A LandmanDepartment of Electrical and Computer Engineering, Vanderbilt University, Nashville, Tennessee, USA.
Vanderbilt University · USVanderbilt University Medical Center · US

Funding

VANDERBILT UNIVERSITY CTSA FOR PEDIATRIC RESEARCHUL1RR024975 · NCRR · VANDERBILT UNIVERSITY · PI BERNARD, GORDON RAPHAEL · 2007 to 2011
$45.7M
The Vanderbilt Institute for Clinical and Translational Research (VICTR)UL1TR000445 · NCATS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI BERNARD, GORDON RAPHAEL · 2012 to 2016
$41.4M
Validation of Biomarkers of Risk for the Early Detection of Lung CancerU01CA152662 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI DEPPEN, STEPHEN, GROGAN, ERIC L · 2010 to 2025
$12.8M
Cellular, molecular and quantitative imaging analysis of screening-detected lung adenocarcinomaU01CA196405 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI MALDONADO, FABIEN · 2015 to 2020
$5.4M
Integrated Training in Engineering and DiabetesT32DK101003 · NIDDK · VANDERBILT UNIVERSITY · PI Jamey D. Young · 2014 to 2026
$3.9M
Novel Integrative Approach for the Early Detection of Lung Cancer using Repeated MeasuresR01CA253923 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI LANDMAN, BENNETT A., MALDONADO, FABIEN · 2021 to 2025
$3.4M
Integrating imaging and biopsy-derived molecular markers for the pre-surgical detection of indolent and aggressive early stage lung adenocarcinomaR01CA275015 · NCI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI Marc Elliott Lenburg, Fabien Maldonado · 2023 to 2026
$2.6M
Martineau Innovation Fund grant through the Vanderbilt-Ingram Cancer Center Thoracic Working GroupNational Science Foundation CAREER 1452485NCATS NIH HHS UL1 TR000445NCATS NIH HHS UL1TR000445-06NCI Early Detection Research Network 2U01CA152662NCI NIH HHS R01 CA253923NCI NIH HHS R01 CA275015NCI NIH HHS U01 CA152662NCI NIH HHS U01 CA196405NCRR NIH HHS UL1 RR024975NCRR NIH HHS UL1RR024975-01NIDDK NIH HHS T32 DK101003
6 · The paper itself

Abstract

backgroundThe kernel used in CT image reconstruction is an important factor that determines the texture of the CT image. Consistency of reconstruction kernel choice is important for quantitative CT-based assessment as kernel differences can lead to substantial shifts in measurements unrelated to underlying anatomical structures. PURPOSE: In this study, we investigate kernel harmonization in a multi-vendor low-dose CT lung cancer screening cohort and evaluate our approach's validity in quantitative CT-based assessments.

methodsUsing the National Lung Screening Trial, we identified CT scan pairs of the same sessions with one reconstructed from a soft tissue kernel and one from a hard kernel. In total, 1000 pairs of five different paired kernel types (200 each) were identified. We adopt the pix2pix architecture to train models for kernel conversion. Each model was trained on 100 pairs and evaluated on 100 withheld pairs. A total of 10 models were implemented. We evaluated the efficacy of kernel conversion based on image similarity metrics including root mean squared error (RMSE), peak signal-to-noise ratio (PSNR), and structural similarity index measure (SSIM) as well as the capability of the models to reduce measurement shifts in quantitative emphysema and body composition measurements. Additionally, we study the reproducibility of standard radiomic features for all kernel pairs before and after harmonization.

resultsOur approach effectively converts CT images from one kernel to another in all paired kernel types, as indicated by the reduction in RMSE (p < 0.05) and an increase in the PSNR (p < 0.05) and SSIM (p < 0.05) for both directions of conversion for all pair types. In addition, there is an increase in the agreement for percent emphysema, skeletal muscle area, and subcutaneous adipose tissue (SAT) area for both directions of conversion. Furthermore, radiomic features were reproducible when compared with the ground truth features.

conclusionsKernel conversion using deep learning reduces measurement variation in percent emphysema, muscle area, and SAT area.

Indexed as

Deep LearningLung NeoplasmsTomography, X-Ray ComputedHumansCT kernel harmonizationdeep learninggenerative adversarial networkslung cancer

Identifiers

PMID38530135
PMCPMC11321937
OpenAlexW4393200675

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.