Evidence map›Paper›PMID 38528768›Full record

ArticleMicrobial biotechnology2024

Combinatorial optimization of pathway, process and media for the production of p-coumaric acid by Saccharomyces cerevisiae.

Sara Moreno-Paz, Rianne van der Hoek, Elif Eliana, Vitor A P Martins Dos Santos, Joep Schmitz, Maria Suarez-Diez

Open access · goldAbstract read
In one paragraph

Article in Microbial biotechnology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Biodesign research · 2026
    Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Sara Moreno-PazLaboratory of Systems and Synthetic Biology, Wageningen University & Research, Wageningen, The Netherlands.ORCID 0000-0001-8626-0601
Rianne van der HoekDepartment of Science and Research-dsm-firmenich, Science & Research, Delft, The Netherlands.
Elif ElianaLaboratory of Systems and Synthetic Biology, Wageningen University & Research, Wageningen, The Netherlands.
Vitor A P Martins Dos SantosBioprocess Engineering Group, Wageningen University & Research, Wageningen, The Netherlands.
Joep SchmitzDepartment of Science and Research-dsm-firmenich, Science & Research, Delft, The Netherlands.
Maria Suarez-DiezLaboratory of Systems and Synthetic Biology, Wageningen University & Research, Wageningen, The Netherlands.ORCID 0000-0001-5845-146X
Wageningen University & Research · NLDSM (Netherlands) · NL

Funding

Horizon 2020 Framework Programme 814408 (Shikifactory100)Nederlandse Organisatie voor Wetenschappelijk Onderzoek GSGT.2019.008
6 · The paper itself

Abstract

Microbial cell factories are instrumental in transitioning towards a sustainable bio-based economy, offering alternatives to conventional chemical processes. However, fulfilling their potential requires simultaneous screening for optimal media composition, process and genetic factors, acknowledging the complex interplay between the organism's genotype and its environment. This study employs statistical design of experiments to systematically explore these relationships and optimize the production of p-coumaric acid (pCA) in Saccharomyces cerevisiae. Two rounds of fractional factorial designs were used to identify factors with a significant effect on pCA production, which resulted in a 168-fold variation in pCA titre. Moreover, a significant interaction between the culture temperature and expression of ARO4 highlighted the importance of simultaneous process and strain optimization. The presented approach leverages the strengths of experimental design and statistical analysis and could be systematically applied during strain and bioprocess design efforts to unlock the full potential of microbial cell factories.

Indexed as

Saccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsCoumaric AcidsMetabolic EngineeringCoumaric Acidsp-coumaric acidSaccharomyces cerevisiae Proteins

Identifiers

PMID38528768
PMCPMC10963908
OpenAlexW4393182923

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.