Evidence map›Paper›PMID 38528494›Full record

ArticleBMC genomics2024

Pituitary transcriptome profile from laying period to incubation period of Changshun green-shell laying hens.

Zhi Chen, Di Wen, Yan Zhang, Jiaying Chen, Fengqian Pan, Wen Zhang, Shuangshuang Zhou, Fen Wang, Ren Mu

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Zhi ChenCollege of Biological Science and Agriculture, Qiannan Normal University for Nationalities, 558000, Duyun, China. 328246780@qq.com.
Di WenCollege of Biological Science and Agriculture, Qiannan Normal University for Nationalities, 558000, Duyun, China. wendyy2007@163.com.
Yan ZhangCollege of Biological Science and Agriculture, Qiannan Normal University for Nationalities, 558000, Duyun, China.
Jiaying ChenCollege of Biological Science and Agriculture, Qiannan Normal University for Nationalities, 558000, Duyun, China.
Fengqian PanCollege of Biological Science and Agriculture, Qiannan Normal University for Nationalities, 558000, Duyun, China.
Wen ZhangCollege of Biological Science and Agriculture, Qiannan Normal University for Nationalities, 558000, Duyun, China.
Shuangshuang ZhouCollege of Biological Science and Agriculture, Qiannan Normal University for Nationalities, 558000, Duyun, China.
Fen WangCollege of Biological Science and Agriculture, Qiannan Normal University for Nationalities, 558000, Duyun, China.
Ren MuCollege of Biological Science and Agriculture, Qiannan Normal University for Nationalities, 558000, Duyun, China. muren0224@163.com.
Qiannan Normal College For Nationalities · CN

Funding

atural Science Research Project of the Department of Education of Guizhou Province Innovation team No.2023089Guizhou Provincial Basic Research Program (Natural Science) ZK[2021]167Guizhou Provincial Basic Research Program (Natural Science) ZK[2023]455Natural Science Research Project of the Department of Education of Guizhou Province KY[2020]071Natural Science Research Project of the Department of Education of Guizhou Province KY[2022]093
6 · The paper itself

Abstract

backgroundIncubation behaviour, an instinct for natural breeding in poultry, is strictly controlled by the central nervous system and multiple neuroendocrine hormones and neurotransmitters, and is closely associated with the cessation of egg laying. Therefore, it is essential for the commercial poultry industry to clarify the molecular regulation mechanism of incubation behaviour. Here, we used high-throughput sequencing technology to examine the pituitary transcriptome of Changshun green-shell laying hen, a local breed from Guizhou province, China, with strong broodiness, in two reproductive stages, including egg-laying phase (LP) and incubation phase (BP). We also analyze the differences in gene expression during the transition from egg-laying to incubation, and identify critical pathways and candidate genes involved in controlling the incubation behaviour in the pituitary.

resultsIn this study, we demonstrated that a total of 2089 differently expressed genes (DEGs) were identified in the pituitary, including 842 up-regulated and 1247 down-regulated genes. Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis revealed that steroid biosynthesis pathway and neuroactive ligand-receptor interaction were significantly enriched based on DEGs commonly identified in pituitary. Further analysis revealed that SRC, ITGB4, ITGB3, PIK3R3 and DRD2 may play crucial roles in the regulation of incubation behaviour.

conclusionsWe identified 2089 DEGs and the key signaling pathways which may be closely correlated with incubation in Changshun green-shell laying hens, and clarified the molecular regulation mechanism of incubation behaviour. Our results indicate the complexity and variety of differences in reproductive behaviour of different chicken breeds.

Indexed as

ChickensTranscriptomeAnimalsFemaleGene Expression ProfilingHormonesPituitary GlandHormonesChangshun green-shell laying hensIncubation periodLaying periodPituitaryTranscriptome analysis

Identifiers

PMID38528494
PMCPMC10962202
OpenAlexW4393159873

What OpenQuestion holds

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.