Evidence map›Paper›PMID 38528171›Full record

ReviewEMBO reports2024

Jump-starting life: balancing transposable element co-option and genome integrity in the developing mammalian embryo.

Marlies E Oomen, Maria-Elena Torres-Padilla

Open access · diamondAbstract readReview
In one paragraph

Review in EMBO reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
13.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. The Molecular Biology of Placental Transport of Calcium to the Human Foetus.International journal of molecular sciences · 2025
    Review
  10. Transposons disrupt genomic stability and trigger cancers.Frontiers in cellular and infection microbiology · 2025
    Review
  11. Review
  12. Repetitive Sequence Stability in Embryonic Stem Cells.International journal of molecular sciences · 2024
    Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Marlies E OomenInstitute of Epigenetics and Stem Cells, Helmholtz Zentrum München, München, Germany.
Maria-Elena Torres-PadillaInstitute of Epigenetics and Stem Cells, Helmholtz Zentrum München, München, Germany. torres-padilla@helmholtz-muenchen.de.ORCID 0000-0002-1020-2074
Helmholtz Zentrum München · DE

Funding

Establishment and visualization of nuclear architecture at the onset of mammalian developmentU01DK127391 · NIDDK · HELMHOLTZ ZENTRUM MUENCHEN - GMBH · PI TORRES PADILLA, MARIA ELENA · 2020 to 2023
$1.5M
NIDDK NIH HHS U01 DK127391
6 · The paper itself

Abstract

Remnants of transposable elements (TEs) are widely expressed throughout mammalian embryo development. Originally infesting our genomes as selfish elements and acting as a source of genome instability, several of these elements have been co-opted as part of a complex system of genome regulation. Many TEs have lost transposition ability and their transcriptional potential has been tampered as a result of interactions with the host throughout evolutionary time. It has been proposed that TEs have been ultimately repurposed to function as gene regulatory hubs scattered throughout our genomes. In the early embryo in particular, TEs find a perfect environment of naïve chromatin to escape transcriptional repression by the host. As a consequence, it is thought that hosts found ways to co-opt TE sequences to regulate large-scale changes in chromatin and transcription state of their genomes. In this review, we discuss several examples of TEs expressed during embryo development, their potential for co-option in genome regulation and the evolutionary pressures on TEs and on our genomes.

Indexed as

DNA Transposable ElementsGene Expression RegulationAnimalsBiological EvolutionChromatinEmbryo, MammalianEvolution, MolecularMammalsChromatinDNA Transposable ElementsGenome EvolutionGenome RegulationPreimplantation DevelopmentTransposable Elements

Identifiers

PMID38528171
PMCPMC11015026
OpenAlexW4393162617

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.