Evidence map›Paper›PMID 38528047›Full record

ArticleScientific reports2024

Identification of the shared hub gene signatures and molecular mechanisms between HIV-1 and pulmonary arterial hypertension.

Huanzhuo Mai, Xing Yang, Yulan Xie, Jie Zhou, Yiru Wei, Tingyan Luo, Jing Yang, Ping Cui, Li Ye, Hao Liang and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Huanzhuo MaiSchool of Public Health, Guangxi Medical University, Nanning, 530021, China.
Xing YangGuangxi Key Laboratory of AIDS Prevention and Treatment, Guangxi Medical University, Nanning, 530021, China.
Yulan XieSchool of Public Health, Guangxi Medical University, Nanning, 530021, China.
Jie ZhouSchool of Public Health, Guangxi Medical University, Nanning, 530021, China.
Yiru WeiSchool of Public Health, Guangxi Medical University, Nanning, 530021, China.
Tingyan LuoSchool of Public Health, Guangxi Medical University, Nanning, 530021, China.
Jing YangSchool of Public Health, Guangxi Medical University, Nanning, 530021, China.
Ping CuiGuangxi Key Laboratory of AIDS Prevention and Treatment, Guangxi Medical University, Nanning, 530021, China.
Li YeSchool of Public Health, Guangxi Medical University, Nanning, 530021, China.
Hao LiangSchool of Public Health, Guangxi Medical University, Nanning, 530021, China.
Jiegang HuangSchool of Public Health, Guangxi Medical University, Nanning, 530021, China. jieganghuang@gxmu.edu.cn.
Guangxi Medical University · CNGuangxi University · CN

Funding

National Natural Science Foundation of China 82060366
6 · The paper itself

Abstract

The close link between HIV-1 infection and the occurrence of pulmonary arterial hypertension (PAH). However, the underlying molecular mechanisms of their interrelation remain unclear. The microarray data of HIV-1 and PAH were downloaded from GEO database. We utilized WGCNA to identify shared genes between HIV-1 and PAH, followed by conducting GO and pathway enrichment analyses. Subsequently, differentially genes analysis was performed using external validation datasets to further filter hub genes. Immunoinfiltration analysis was performed using CIBERSORT. Finally, hub gene expression was validated using scRNA-seq data. We identified 109 shared genes through WGCNA, primarily enriched in type I interferon (IFN) pathways. By taking the intersection of WGCNA important module genes and DEGs, ISG15 and IFI27 were identified as pivotal hub genes. Immunoinfiltration analysis and scRNA-seq results indicated the significant role of monocytes in the shared molecular mechanisms of HIV-1 and PAH. In summary, our study illustrated the possible mechanism of PAH secondary to HIV-1 and showed that the heightened IFN response in HIV-1 might be a crucial susceptibility factor for PAH, with monocytes being pivotal cells involved in the type I IFN response pathway. This provides potential new insights for further investigating the molecular mechanisms connecting HIV-1 and PAH.

Indexed as

HIV-1HIV SeropositivityInterferon Type IPulmonary Arterial HypertensionComputational BiologyDatabases, FactualFamilial Primary Pulmonary HypertensionHumansInterferon Type IHIV-1Hub genesPulmonary arterial hypertensionscRNA-seqType I IFN

Identifiers

PMID38528047
PMCPMC10963360
OpenAlexW4393162833

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.