Evidence map›Paper›PMID 38526778›Full record

ArticleVirus genes2024

Donkey-like kirkovirus is associated with diarrhea in piglets.

Panpan Tong, Zunbao Wang, Yueyi Dang, Lei Zhang, Guangwei Song, Xiaozhen Song, Juanjuan Pan, Ling Kuang, Junhui Li, Gang Lu and 1 more

Abstract read
PubMed Publisher
In one paragraph

Article in Virus genes, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Panpan Tong *Xinjiang Key Laboratory of Herbivore Drug Research and Creation, College of Veterinary Medicine, Xinjiang Agricultural University, Urumqi, 830052, China.
Zunbao Wang *College of Veterinary Medicine, Jilin University, Changchun, 130062, China.
Yueyi Dang *Xinjiang Key Laboratory of Herbivore Drug Research and Creation, College of Veterinary Medicine, Xinjiang Agricultural University, Urumqi, 830052, China.
Lei ZhangAksu Regional Animal Disease Control and Diagnostic Center, Aksu, 843000, China.
Guangwei SongTecon Bio-Technology Co, LTD, Urumqi, 830032, China.
Xiaozhen SongPeople's Government of Ziniquanzi Town, Ziniquanzi, 831502, China.
Juanjuan PanXinjiang Key Laboratory of Herbivore Drug Research and Creation, College of Veterinary Medicine, Xinjiang Agricultural University, Urumqi, 830052, China.
Ling KuangXinjiang Key Laboratory of Herbivore Drug Research and Creation, College of Veterinary Medicine, Xinjiang Agricultural University, Urumqi, 830052, China.
Junhui LiTecon Bio-Technology Co, LTD, Urumqi, 830032, China. lijunhui@tecon-bio.com.
Gang LuCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, 510642, China. LG@scau.edu.cn.
Jinxin XieXinjiang Key Laboratory of Herbivore Drug Research and Creation, College of Veterinary Medicine, Xinjiang Agricultural University, Urumqi, 830052, China. xiejinxin198683@163.com.
Xinjiang Agricultural University · CNChinese Academy of Agricultural Sciences · CNJilin University · CNSouth China Agricultural University · CN

Funding

National Natural Science Foundation of China 32060808The Natural Science Foundation of Xinjiang Uyghur Autonomous Region 2022D01A167
6 · The paper itself

Abstract

Kirkovirus (kirV), a seemingly novel virus family, has been found in horses and donkeys. The study's objectives are to investigate the presence of the virus in swine. In this study, donkey-like kirV was detected in rectal swabs of piglets with diarrhea, and the positive rate was found to be 100% (149/149). However, this virus was detected in only one of 261 clinically healthy piglets, which suggested a strong relationship between the kirV and the diarrheic disease. We obtained the whole-genome sequences of three kirVs (Cj-D5, Cj-D32, and Cj-D43), with a length of 3750 nucleotides (nt) and sharing 99.9% nt identity with donkey kirVs. Furthermore, the three viruses shared 88.5-100% and 23-51% of the Rep protein sequence, similar to available reference strains of Kirkoviridae and Circoviridae, respectively. Moreover, like horse and donkey kirVs, the RCR domain and P-loop NTPase domains of Rep protein and nonanucleotide motif (CAATATTAC) of the three viruses were similar to those of Circoviruses and Cycloviruses. Phylogenetic analysis showed that these viruses could be grouped with members in the proposed family Kirkoviridae. This is the first report to describe that kirV can circulate in piglets with diarrhea, and future studies are needed to determine the pathogenesis of this virus.

Indexed as

DiarrheaEquidaeGenome, ViralPhylogenySwine DiseasesAnimalsSwineWhole Genome SequencingDiarrheic diseaseKirkovirusPigleta

Identifiers

PMID38526778
OpenAlexW4393155582

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.