Evidence map›Paper›PMID 38526725›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2024

Contracting the Host Range of Bacteriophage T7 Using a Continuous Evolution System.

Tzvi Holtzman, Ram Nechooshtan, Ido Yosef, Udi Qimron

Abstract read
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In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.7field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Identification and functional characterization of a novelFrontiers in cellular and infection microbiology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Tzvi HoltzmanDepartment of Clinical Microbiology and Immunology, School of Medicine, Tel Aviv University, Tel Aviv, Israel. tzvih@iibr.gov.il.
Ram NechooshtanDepartment of Biotechnology, Israel Institute for Biological Research, Ness Ziona, Israel.
Ido YosefDepartment of Clinical Microbiology and Immunology, School of Medicine, Tel Aviv University, Tel Aviv, Israel.
Udi QimronDepartment of Clinical Microbiology and Immunology, School of Medicine, Tel Aviv University, Tel Aviv, Israel. ehudq@post.tau.ac.il.
Israel Institute for Biological Research · ILTel Aviv University · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacteriophage T7 is an intracellular virus that recognizes its host via tail and tail fiber proteins known as receptor-binding proteins (RBPs). The RBPs attach to a specific lipopolysaccharide (LPS) displayed on the host. While there are various reports of phage host range expansion resulting from mutations in the RBP encoding genes, there is little evidence for contraction of host range. Notably, most experimental systems have not monitored changes in host range in the presence of several hosts simultaneously. Here, we use a continuous evolution system to show that T7 phages grown in the presence of five restrictive strains and one permissive host, each with a different LPS, gradually cease to recognize the restrictive strains. Remarkably, this result was obtained in experiments with six different permissive hosts. The altered specificity is due to mutations in the RBPs as determined by gene sequencing. The results of using this system demonstrate a major role for RBPs in restricting the range of futile infections, and this process can be harnessed to reduce the host range in applications such as recognition and elimination of a specific bacterial serotype by bacteriophages.

Indexed as

BacteriophagesBacteriophage T7Carrier ProteinsHost SpecificityLipopolysaccharidesProtein BindingCarrier ProteinsLipopolysaccharidesAseptic techniquesAseptic techniquesContinuous evolution systemContinuous evolution systemContinuous fermentationPermissive hostPermissive hostRestrictive strainRestrictive strainsSpecialist phage

Identifiers

PMID38526725
OpenAlexW4393170990

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.