Evidence map›Paper›PMID 38521057›Full record

ArticleCell stem cell2024

Autofluorescence is a biomarker of neural stem cell activation state.

Christopher S Morrow, Kelsey Tweed, Sabina Farhadova, Alex J Walsh, Bo P Lear, Avtar Roopra, Ryan D Risgaard, Payton C Klosa, Zachary P Arndt, Ella R Peterson and 4 more

Open access · greenAbstract read
In one paragraph

Article in Cell stem cell, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
8.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Autofluorescence lifetime flow cytometry with time-correlated single photon counting.Cytometry. Part A : the journal of the International Society for Analytical Cytology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Christopher S MorrowDepartment of Neuroscience, University of Wisconsin-Madison, Madison, WI 53705, USA.
Kelsey TweedMorgridge Institute for Research, Madison, WI 53715, USA; Department of Biomedical Engineering, University of Wisconsin-Madison, Madison, WI 53706, USA.
Sabina FarhadovaDepartment of Neuroscience, University of Wisconsin-Madison, Madison, WI 53705, USA.
Alex J WalshMorgridge Institute for Research, Madison, WI 53715, USA; Department of Biomedical Engineering, University of Wisconsin-Madison, Madison, WI 53706, USA.
Bo P LearDepartment of Neuroscience, University of Wisconsin-Madison, Madison, WI 53705, USA.
Avtar RoopraDepartment of Neuroscience, University of Wisconsin-Madison, Madison, WI 53705, USA.
Ryan D RisgaardDepartment of Neuroscience, University of Wisconsin-Madison, Madison, WI 53705, USA.
Payton C KlosaDepartment of Neuroscience, University of Wisconsin-Madison, Madison, WI 53705, USA.
Zachary P ArndtDepartment of Neuroscience, University of Wisconsin-Madison, Madison, WI 53705, USA.
Ella R PetersonDepartment of Neuroscience, University of Wisconsin-Madison, Madison, WI 53705, USA.
Michelle M ChiDepartment of Neuroscience, University of Wisconsin-Madison, Madison, WI 53705, USA.
Allison G HarrisDepartment of Neuroscience, University of Wisconsin-Madison, Madison, WI 53705, USA.
Melissa C SkalaMorgridge Institute for Research, Madison, WI 53715, USA; Department of Biomedical Engineering, University of Wisconsin-Madison, Madison, WI 53706, USA.
Darcie L MooreDepartment of Neuroscience, University of Wisconsin-Madison, Madison, WI 53705, USA. Electronic address: darcie.moore@wisc.edu.
University of Wisconsin–Madison · USUniversity of Wisconsin System · US

Funding

UW COMPREHENSIVE CANCER CENTER SUPPORTP30CA014520 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI AMY TRENTHAM-DIETZ · 1985 to 2026
$142.6M
Integrated Training For Physician-ScientistsT32GM140935 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI Anna Huttenlocher, Jeniel E Nett · 2021 to 2026
$6.5M
Training Program In Molecular AND Cellular PharmacologyT32GM008688 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI AUDHYA, ANJON · 1998 to 2020
$6.0M
Functional optical imaging for rapid, label-free predictions of treatment response and clonal evolution in patient-derived cancer organoidsR01CA272855 · NCI · MORGRIDGE INSTITUTE FOR RESEARCH, INC. · PI Dustin A Deming, Melissa Caroline Skala · 2023 to 2026
$3.1M
Label-free imaging of CAR T cell metabolismR01CA278051 · NCI · MORGRIDGE INSTITUTE FOR RESEARCH, INC. · PI Christian Capitini, Krishanu Saha · 2023 to 2026
$2.6M
Probing the Protective Role of EZH2 in EpilepsyR01NS108756 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI DINGLEDINE, RAYMOND J, ROOPRA, AVTAR S · 2019 to 2023
$2.5M
Label-free single-cell imaging for quality control of cardiomyocyte biomanufacturingR01HL165726 · NHLBI · MORGRIDGE INSTITUTE FOR RESEARCH, INC. · PI Sean P Palecek, Melissa Caroline Skala · 2023 to 2026
$2.5M
The mechanisms and functional role of the asymmetric segregation of cellular cargoes in stem cellsDP2NS111818 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI MOORE, DARCIE LEANN · 2018 to 2018
$2.2M
Label-free, live-cell classification of neural stem cell activation state and dynamicsR56NS130450 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI MOORE, DARCIE LEANN · 2023 to 2023
$568k
Multi-color Benchtop Flow CytometerS10RR025483 · NCRR · UNIVERSITY OF WISCONSIN-MADISON · PI BUSHMAN, WADE A · 2009 to 2009
$449k
NCI NIH HHS P30 CA014520NCI NIH HHS R01 CA272855NCI NIH HHS R01 CA278051NCRR NIH HHS S10 RR025483NHLBI NIH HHS R01 HL165726NIGMS NIH HHS T32 GM008688NIGMS NIH HHS T32 GM140935NINDS NIH HHS DP2 NS111818NINDS NIH HHS R01 NS108756NINDS NIH HHS R56 NS130450
6 · The paper itself

Abstract

Neural stem cells (NSCs) must exit quiescence to produce neurons; however, our understanding of this process remains constrained by the technical limitations of current technologies. Fluorescence lifetime imaging (FLIM) of autofluorescent metabolic cofactors has been used in other cell types to study shifts in cell states driven by metabolic remodeling that change the optical properties of these endogenous fluorophores. Using this non-destructive, live-cell, and label-free strategy, we found that quiescent NSCs (qNSCs) and activated NSCs (aNSCs) have unique autofluorescence profiles. Specifically, qNSCs display an enrichment of autofluorescence localizing to a subset of lysosomes, which can be used as a graded marker of NSC quiescence to predict cell behavior at single-cell resolution. Coupling autofluorescence imaging with single-cell RNA sequencing, we provide resources revealing transcriptional features linked to deep quiescence and rapid NSC activation. Together, we describe an approach for tracking mouse NSC activation state and expand our understanding of adult neurogenesis.

Indexed as

Neural Stem CellsAnimalsBiomarkersMiceNeurogenesisNeuronsBiomarkersactivationadult neurogenesisautofluorescenceFLIMfluorescence lifetime imagingintrinsic fluorescencelysosomesNAD(P)Hneural stem cellsquiescence

Identifiers

PMID38521057
PMCPMC10997463
OpenAlexW4393082008

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.