Evidence map›Paper›PMID 38520359›Full record

ArticleHuman brain mapping2024

A practical evaluation of measures derived from compressed sensing diffusion spectrum imaging.

Hamsanandini Radhakrishnan, Chenying Zhao, Valerie J Sydnor, Erica B Baller, Philip A Cook, Damien A Fair, Barry Giesbrecht, Bart Larsen, Kristin Murtha, David R Roalf and 8 more

Open access · goldAbstract read
In one paragraph

Article in Human brain mapping, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 4 institutions in 1 country.

Hamsanandini RadhakrishnanLifespan Informatics and Neuroimaging Center, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Chenying ZhaoLifespan Informatics and Neuroimaging Center, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Valerie J SydnorLifespan Informatics and Neuroimaging Center, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Erica B BallerLifespan Informatics and Neuroimaging Center, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Philip A CookDepartment of Radiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Damien A FairMasonic Institute for the Developing Brain, University of Minnesota, Minneapolis, Minnesota, USA.
Barry GiesbrechtDepartment of Psychological and Brain Sciences, University of California, Santa Barbara, California, USA.
Bart LarsenLifespan Informatics and Neuroimaging Center, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Kristin MurthaLifespan Informatics and Neuroimaging Center, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
David R RoalfDepartment of Psychiatry, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Sage Rush-GoebelLifespan Informatics and Neuroimaging Center, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Russell T ShinoharaDepartment of Biostatistics, Epidemiology and Informatics, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Haochang ShouDepartment of Biostatistics, Epidemiology and Informatics, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
M Dylan TisdallDepartment of Radiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Jean M VettelDepartment of Psychological and Brain Sciences, University of California, Santa Barbara, California, USA.
Scott T GraftonDepartment of Psychological and Brain Sciences, University of California, Santa Barbara, California, USA.
Matthew CieslakLifespan Informatics and Neuroimaging Center, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Theodore D SatterthwaiteLifespan Informatics and Neuroimaging Center, University of Pennsylvania, Philadelphia, Pennsylvania, USA.ORCID 0000-0001-7072-9399
Lifespan · USUniversity of Pennsylvania · USUniversity of California, Santa Barbara · USUniversity of Minnesota · US

Funding

Longitudinal Mapping of Network Development Underlying Executive Dysfunction in AdolescenceR01MH113550 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI Danielle Smith Bassett, Theodore Satterthwaite · 2018 to 2026
$6.9M
Personalized Functional Network Modeling to Characterize and Predict Psychopathology in YouthR01EB022573 · NIBIB · UNIVERSITY OF PENNSYLVANIA · PI Yong Fan, Theodore Satterthwaite · 2016 to 2026
$6.0M
Inter-modal Coupling Image AnalyticsR01MH112847 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI Theodore Satterthwaite, Russell Takeshi Shinohara · 2017 to 2026
$5.9M
Precision mapping of individualized executive networks in youthR37MH125829 · NIMH · UNIVERSITY OF MINNESOTA · PI Damien A Fair, Theodore Satterthwaite · 2021 to 2026
$4.7M
Harmonization of Multi-Site Neuroimaging Data from Complex Study DesignsR01MH123550 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI SHINOHARA, RUSSELL TAKESHI · 2020 to 2025
$4.0M
Ultra-high field GluCEST MRI and MRS in youth at risk for psychosisR01MH120174 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI ROALF, DAVID R · 2020 to 2024
$3.8M
Olfactory and facial markers of developmental risk for psychosis in 22q11 deletion syndromeR01MH119185 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI ROALF, DAVID R · 2019 to 2024
$3.5M
Reproducible imaging-based brain growth charts for psychiatryR01MH120482 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI MILHAM, MICHAEL PETER, SATTERTHWAITE, THEODORE · 2019 to 2023
$3.5M
Network Control and Functional Context: Mechanisms for TMS ResponseRF1MH116920 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI BASSETT, DANIELLE SMITH, OATHES, DESMOND · 2018 to 2018
$2.8M
Brain iron as a neurodevelopmental mechanism for transdianostic executive dysfunctionR00MH127293 · NIMH · UNIVERSITY OF MINNESOTA · PI Bart Larsen · 2023 to 2026
$821k
Depression as a disease of network disruption: learning from multiple sclerosisK23MH133118 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI Erica Berlin Baller · 2023 to 2026
$780k
Brain iron as a neurodevelopmental mechanism for transdianostic executive dysfunctionK99MH127293 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI LARSEN, BART · 2022 to 2023
$168k
NIBIB NIH HHS R01 EB022573NIH HHS K99MH127293NIH HHS R01EB022573NIH HHS R01MH112847NIH HHS R01MH113550NIH HHS R01MH119185NIH HHS R01MH120174NIH HHS R01MH120482NIH HHS R01MH123550NIH HHS R37MH125829NIH HHS RF1MH116920NIMH NIH HHS K23 MH133118NIMH NIH HHS K99 MH127293NIMH NIH HHS L30 MH127652NIMH NIH HHS R00 MH127293NIMH NIH HHS R01 MH112847NIMH NIH HHS R01 MH113550NIMH NIH HHS R01 MH119185NIMH NIH HHS R01 MH120174NIMH NIH HHS R01 MH120482NIMH NIH HHS R01 MH123550NIMH NIH HHS R37 MH125829NIMH NIH HHS RF1 MH116920
6 · The paper itself

Abstract

Diffusion Spectrum Imaging (DSI) using dense Cartesian sampling of q-space has been shown to provide important advantages for modeling complex white matter architecture. However, its adoption has been limited by the lengthy acquisition time required. Sparser sampling of q-space combined with compressed sensing (CS) reconstruction techniques has been proposed as a way to reduce the scan time of DSI acquisitions. However prior studies have mainly evaluated CS-DSI in post-mortem or non-human data. At present, the capacity for CS-DSI to provide accurate and reliable measures of white matter anatomy and microstructure in the living human brain remains unclear. We evaluated the accuracy and inter-scan reliability of 6 different CS-DSI schemes that provided up to 80% reductions in scan time compared to a full DSI scheme. We capitalized on a dataset of 26 participants who were scanned over eight independent sessions using a full DSI scheme. From this full DSI scheme, we subsampled images to create a range of CS-DSI images. This allowed us to compare the accuracy and inter-scan reliability of derived measures of white matter structure (bundle segmentation, voxel-wise scalar maps) produced by the CS-DSI and the full DSI schemes. We found that CS-DSI estimates of both bundle segmentations and voxel-wise scalars were nearly as accurate and reliable as those generated by the full DSI scheme. Moreover, we found that the accuracy and reliability of CS-DSI was higher in white matter bundles that were more reliably segmented by the full DSI scheme. As a final step, we replicated the accuracy of CS-DSI in a prospectively acquired dataset (n = 20, scanned once). Together, these results illustrate the utility of CS-DSI for reliably delineating in vivo white matter architecture in a fraction of the scan time, underscoring its promise for both clinical and research applications.

Indexed as

Diffusion Magnetic Resonance ImagingWhite MatterAlgorithmsAutopsyBrainHumansReproducibility of Resultscompressed sensingdiffusion‐weighted imagingMRI acquisitionwhite matter

Identifiers

PMID38520359
PMCPMC10960521
OpenAlexW4393119275

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.