Evidence map›Paper›PMID 38519923›Full record

ArticleBMC genomics2024

Comparative transcriptome analysis reveals the importance of phenylpropanoid biosynthesis for the induced resistance of 84K poplar to anthracnose.

Fei Xing, Linxuan Zhang, Wei Ge, Haixia Fan, Chengming Tian, Fanli Meng

Abstract read
In one paragraph

Article in BMC genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Genome-Wide Identification of the PAL Gene Family inInternational journal of molecular sciences · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Fei Xing *The Key Laboratory for Silviculture and Conservation of Ministry of Education, College of Forestry, Beijing Forestry University, 100083, Beijing, China.
Linxuan Zhang *The Key Laboratory for Silviculture and Conservation of Ministry of Education, College of Forestry, Beijing Forestry University, 100083, Beijing, China.
Wei GeThe Key Laboratory for Silviculture and Conservation of Ministry of Education, College of Forestry, Beijing Forestry University, 100083, Beijing, China.
Haixia FanThe Key Laboratory for Silviculture and Conservation of Ministry of Education, College of Forestry, Beijing Forestry University, 100083, Beijing, China.
Chengming TianThe Key Laboratory for Silviculture and Conservation of Ministry of Education, College of Forestry, Beijing Forestry University, 100083, Beijing, China.
Fanli MengThe Key Laboratory for Silviculture and Conservation of Ministry of Education, College of Forestry, Beijing Forestry University, 100083, Beijing, China. mengfanli@bjfu.edu.cn.

Funding

Beijing Forestry University Undergraduate Training Programs for Innovation and Entrepreneurship X202210022019National Natural Science Foundation of China 32201564
6 · The paper itself

Abstract

backgroundPoplar anthracnose, which is one of the most important tree diseases, is primarily caused by Colletotrichum gloeosporioides, which has been detected in poplar plantations in China and is responsible for serious economic losses. The characteristics of 84K poplar that have made it one of the typical woody model plants used for investigating stress resistance include its rapid growth, simple reproduction, and adaptability.

resultsIn this study, we found that the resistance of 84K poplar to anthracnose varied considerably depending on how the samples were inoculated of the two seedlings in each tissue culture bottle, one (84K-Cg) was inoculated for 6 days, whereas the 84K-DCg samples were another seedling inoculated at the 6th day and incubated for another 6 days under the same conditions. It was showed that the average anthracnose spot diameter on 84K-Cg and 84K-DCg leaves was 1.23 ± 0.0577 cm and 0.67 ± 0.1154 cm, respectively. Based on the transcriptome sequencing analysis, it was indicated that the upregulated phenylpropanoid biosynthesis-related genes in 84K poplar infected with C. gloeosporioides, including genes encoding PAL, C4H, 4CL, HCT, CCR, COMT, F5H, and CAD, are also involved in other KEGG pathways (i.e., flavonoid biosynthesis and phenylalanine metabolism). The expression levels of these genes were lowest in 84K-Cg and highest in 84K-DCg.

conclusionsIt was found that PAL-related genes may be crucial for the induced resistance of 84K poplar to anthracnose, which enriched in the phenylpropanoid biosynthesis. These results will provide the basis for future research conducted to verify the contribution of phenylpropanoid biosynthesis to induced resistance and explore plant immune resistance-related signals that may regulate plant defense capabilities, which may provide valuable insights relevant to the development of effective and environmentally friendly methods for controlling poplar anthracnose.

Indexed as

Gene Expression ProfilingTranscriptomeChina84K poplarColletotrichum gloeosporioidesInduced resistancePhenylpropanoid biosynthesis

Identifiers

PMID38519923
PMCPMC10960379

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